Literature DB >> 27233114

Getting it done at the ends: Pif1 family DNA helicases and telomeres.

Carly L Geronimo1, Virginia A Zakian2.   

Abstract

It is widely appreciated that the ends of linear DNA molecules cannot be fully replicated by the conventional replication apparatus. Less well known is that semi-conservative replication of telomeric DNA also presents problems for DNA replication. These problems likely arise from the atypical chromatin structure of telomeres, the GC-richness of telomeric DNA that makes it prone to forming DNA secondary structures, and from RNA-DNA hybrids, formed by transcripts of one or both DNA strands. Given the different aspects of telomeres that complicate their replication, it is not surprising that multiple DNA helicases promote replication of telomeric DNA. This review focuses on one such class of DNA helicases, the Pif1 family of 5'-3' DNA helicases. In budding and fission yeasts, Pif1 family helicases impact both telomerase-mediated and semi-conservative replication of telomeric DNA as well as recombination-mediated telomere lengthening.
Copyright © 2016. Published by Elsevier B.V.

Entities:  

Keywords:  ALT; Break induced replication; DNA replication; Helicase; Pif1; TERRA; Telomerase; Telomere

Mesh:

Substances:

Year:  2016        PMID: 27233114      PMCID: PMC5441554          DOI: 10.1016/j.dnarep.2016.05.021

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  84 in total

1.  Inhibition of telomerase by G-quartet DNA structures.

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Journal:  Nature       Date:  1991-04-25       Impact factor: 49.962

Review 2.  Checkpoint responses to replication fork barriers.

Authors:  Sarah Lambert; Antony M Carr
Journal:  Biochimie       Date:  2004-12-10       Impact factor: 4.079

Review 3.  Mutations arising during repair of chromosome breaks.

Authors:  Anna Malkova; James E Haber
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Authors:  Kazunobu Futami; Akira Shimamoto; Yasuhiro Furuichi
Journal:  Biol Pharm Bull       Date:  2007-09       Impact factor: 2.233

Review 5.  Causes and consequences of replication stress.

Authors:  Michelle K Zeman; Karlene A Cimprich
Journal:  Nat Cell Biol       Date:  2014-01       Impact factor: 28.824

Review 6.  DNA repair at telomeres: keeping the ends intact.

Authors:  Christopher J Webb; Yun Wu; Virginia A Zakian
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-06-01       Impact factor: 10.005

7.  Break-induced replication is a source of mutation clusters underlying kataegis.

Authors:  Cynthia J Sakofsky; Steven A Roberts; Ewa Malc; Piotr A Mieczkowski; Michael A Resnick; Dmitry A Gordenin; Anna Malkova
Journal:  Cell Rep       Date:  2014-05-29       Impact factor: 9.423

8.  The telomeric transcriptome of Schizosaccharomyces pombe.

Authors:  Amadou Bah; Harry Wischnewski; Vadim Shchepachev; Claus M Azzalin
Journal:  Nucleic Acids Res       Date:  2011-12-01       Impact factor: 16.971

9.  Break-induced replication requires DNA damage-induced phosphorylation of Pif1 and leads to telomere lengthening.

Authors:  Yulia Vasianovich; Lea A Harrington; Svetlana Makovets
Journal:  PLoS Genet       Date:  2014-10-16       Impact factor: 5.917

10.  TRF1 negotiates TTAGGG repeat-associated replication problems by recruiting the BLM helicase and the TPP1/POT1 repressor of ATR signaling.

Authors:  Michal Zimmermann; Tatsuya Kibe; Shaheen Kabir; Titia de Lange
Journal:  Genes Dev       Date:  2014-10-24       Impact factor: 12.890

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  28 in total

Review 1.  RNase H2-RED carpets the path to eukaryotic RNase H2 functions.

Authors:  Susana M Cerritelli; Robert J Crouch
Journal:  DNA Repair (Amst)       Date:  2019-10-23

Review 2.  The role of fork stalling and DNA structures in causing chromosome fragility.

Authors:  Simran Kaushal; Catherine H Freudenreich
Journal:  Genes Chromosomes Cancer       Date:  2019-01-29       Impact factor: 5.006

3.  Sequential eviction of crowded nucleoprotein complexes by the exonuclease RecBCD molecular motor.

Authors:  Tsuyoshi Terakawa; Sy Redding; Timothy D Silverstein; Eric C Greene
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

4.  Pif1 helicase unfolding of G-quadruplex DNA is highly dependent on sequence and reaction conditions.

Authors:  Alicia K Byrd; Matthew R Bell; Kevin D Raney
Journal:  J Biol Chem       Date:  2018-09-26       Impact factor: 5.157

5.  Insights into the structural and mechanistic basis of multifunctional S. cerevisiae Pif1p helicase.

Authors:  Ke-Yu Lu; Wei-Fei Chen; Stephane Rety; Na-Nv Liu; Wen-Qiang Wu; Yang-Xue Dai; Dan Li; Hai-Yun Ma; Shuo-Xing Dou; Xu-Guang Xi
Journal:  Nucleic Acids Res       Date:  2018-02-16       Impact factor: 16.971

Review 6.  Close encounters: Moving along bumps, breaks, and bubbles on expanded trinucleotide tracts.

Authors:  Aris A Polyzos; Cynthia T McMurray
Journal:  DNA Repair (Amst)       Date:  2017-06-09

Review 7.  Mechanistic and biological considerations of oxidatively damaged DNA for helicase-dependent pathways of nucleic acid metabolism.

Authors:  Jack D Crouch; Robert M Brosh
Journal:  Free Radic Biol Med       Date:  2016-11-22       Impact factor: 7.376

Review 8.  Structure and function of Pif1 helicase.

Authors:  Alicia K Byrd; Kevin D Raney
Journal:  Biochem Soc Trans       Date:  2017-09-12       Impact factor: 5.407

9.  Lysine acetylation regulates the activity of nuclear Pif1.

Authors:  Onyekachi E Ononye; Christopher W Sausen; Lata Balakrishnan; Matthew L Bochman
Journal:  J Biol Chem       Date:  2020-09-02       Impact factor: 5.157

Review 10.  Emerging roles of CST in maintaining genome stability and human disease.

Authors:  Jason A Stewart; Yilin Wang; Stephanie M Ackerson; Percy Logan Schuck
Journal:  Front Biosci (Landmark Ed)       Date:  2018-03-01
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