| Literature DB >> 27216812 |
Clement Isaac1,2, Marc Ciosi3,4, Alana Hamilton2, Kathleen Maria Scullion2, Peter Dede5, Igho Benjamin Igbinosa1, Oyebiguwa Patrick Goddey Nmorsi6, Dan Masiga2,7, C Michael R Turner2.
Abstract
BACKGROUND: Animal African Trypanosomiasis (AAT) is caused by several species of trypanosomes including Trypanosoma congolense, T. vivax, T. godfreyi, T. simiae and T. brucei. Two of the subspecies of T. brucei also cause Human African Trypanosomiasis. Although some of them can be mechanically transmitted by biting flies; these trypanosomes are all transmitted by tsetse flies which are the cyclical vectors of Trypanosoma congolense, T. godfreyi, T. simiae and T. brucei. We present here the first report assessing the prevalence of trypanosomes in tsetse flies in Nigeria using molecular tools.Entities:
Keywords: Animal African Trypanosomiasis; Glossina morsitans submorsitans; Glossina palpalis palpalis; Glossina tachinoides; ITS1; Trypanosoma congolense Savannah Trypanosoma congolense ForestTrypanosoma godfreyi Trypanosoma simiae; Trypanosoma vivax
Mesh:
Year: 2016 PMID: 27216812 PMCID: PMC4877947 DOI: 10.1186/s13071-016-1585-3
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
PCR primers used
| Target | Amplicon size (bp) | Forward primer nameb | Forward primer sequence (5’-3’) | Reverse primer nameb | Reverse primer sequence (5’-3’) | Reference |
|---|---|---|---|---|---|---|
| Trypanosome ITS1 | 250 to 700a | ITS1 CF | CCGGAAGTTCACCGATATTG | ITS1 BR | TTGCTGCGTTCTTCAACGAA | [ |
|
| 316 | TCS1 | CGAGAACGGGCACTTTGCGA | TCS2 | GGACAAACAAATCCCGCACA | [ |
|
| 350 | TCF1 | GGACACGCCAGAAGGTACTT | TCF2 | GTTCTCGCACCAAATCCAAC | [ |
aVarious sizes between 250 and 700 bp depending on the trypanosome(s) species present in the sample (T. brucei ssp.: ~480 bp; T. congolense Savannah/Forest: ~700 bp, T. congolense Kilifi ~620 bp; T. simiae: ~400 bp; T. simiae Tsavo: ~370 bp; T. godfreyi: ~300 bp and T. vivax: ~250 bp; bName used in the initial publication
Prevalence (95 % confidence intervals) of trypanosomes in male and female flies
| Species | Sex |
| All |
|
|
|
|
|
|
|---|---|---|---|---|---|---|---|---|---|
|
| Male | 98 | 6.1 % (2.3–12.9 %) | 3.1 % (0.6–8.7 %) | 3.1 % (0.6–8.7 %) | 0.0 % (0–3.7 %) | 3.1 % (0.6–8.7 %) | 0.0 % (0–3.7 %) | 0.0 % (0–3.7 %) |
| Female | 100 | 8.0 % (3.5–15.2 %) | 2.0 % (0.2–7.0 %) | 2.0 % (0.2–7.0 %) | 0.0 % (0–3.6 %) | 6.0 % (2.2–12.6 %) | 0.0 % (0–3.6 %) | 0.0 % (0–3.6 %) | |
|
| Male | 40 | 2.5 % (0–13.2 %) | 2.5 % (0–13.2 %) | 2.5 % (0–13.2 %) | 0.0 % (0–8.8 %) | 0.0 % (0–8.8 %) | 0.0 % (0–8.8 %) | 0.0 % (0–8.8 %) |
| Female | 161 | 14.3 % (9.3–20.7 %) | 8.1 % (4.4–13.4 %) | 6.2 % (3–11.1 %) | 2.5 % (0–6.2 %) | 5.6 % (2.6–10.4 %) | 0.0 % (0–2.3 %) | 0.6 % (0–3.4 %) | |
|
| Male | 17 | 11.8 % (1.5–36.4 %) | 5.9 % (0–28.7 %) | 0.0 % (0–19.5 %) | 5.9 % (0–28.7 %) | 0.0 % (0–19.5 %) | 5.9 % (0–28.7 %) | 0.0 % (0–19.5 %) |
| Female | 72 | 13.9 % (6.9–24.1 %) | 8.3 % (3.1–17.3 %) | 8.3 % (3.1–17.3 %) | 0.0 % (0-5 %) | 5.6 % (1.5–13.6 %) | 0.0 % (0–5 %) | 0.0 % (0–5 %) |
Notes: In agreement with ISID News, this table is a modification of the one available in the fellowship report by Issac et al. [23], n: sample size; All: All trypanosomes; T. c. subspp.: Trypanosoma congolense subspp. (which refers to both T. congolense subspecies combined); T. c. S.: Trypanosoma congolense Savannah; T. c. F.: Trypanosoma congolense Forest; T. v.: Trypanosoma vivax; T. s.: Trypanosoma simiae; T. g.: Trypanosoma godfreyi. 95 % confidence intervals are indicated in parentheses
Fig. 1Trypanosome prevalence in the three species (a) and the two sites (b) studied. Error bars corresponds to 95 % confidence intervals
Trypanosoma congolense subspp. detected using ITS1 PCR in abdomen and ‘head plus proboscis’ DNA preparations
| Abdomen | |||
|---|---|---|---|
| Positive | Negative | ||
| Head plus proboscis | Positive | 6 (1.3 %) | 2 (0.4 %) |
| Negative | 15 (3.2 %) | 442 (95.1 %) | |
Note: Data are combined for all three species of tsetse fly. Trypanosoma congolense subspp. refers to both T. congolense subspecies combined
Trypanosoma vivax detected using ITS1 PCR in abdomen and ‘head plus proboscis’ DNA preparations
| Abdomen | |||
|---|---|---|---|
| Positive | Negative | ||
| Head plus proboscis | Positive | 0 | 22 (4.7 %) |
| Negative | 0 | 443 (95.3 %) | |
Note: Data are combined for all three species of tsetse fly
Multiple logistic regression analyses on trypanosome prevalence
| Dataset considered | Trypanosome prevalence investigated | Explanatory variables in the selected model | Odd ratio |
|
|---|---|---|---|---|
| On complete dataset | All trypanosomes | ‘fly sex’ | 2.286 |
|
|
| ‘collection site’ | 3.025 |
| |
|
| ‘collection site’ | 0.565 | 0.625 | |
| ‘fly sex’ | 0.646 | 0.637 | ||
| ‘collection site’ × ‘fly sex’ | 6.419 | 0.182 | ||
|
| ‘collection site’ | 4.1 × 107 | 0.993 | |
|
| ‘collection site’ | 2.7 × 10-7 | 0.986 | |
| ‘fly sex’ | 2.021 | 0.330 | ||
| ‘collection site’ × ‘fly sex’ | 3.4 × 106 | 0.986 | ||
| On Yankari dataset | All trypanosomes | ‘fly sex’ | 2.985 | 0.079 |
|
| ‘fly sex’ | 2.453 | 0.237 | |
|
| ‘fly sex’ | 4.148 | 0.172 | |
|
| ‘tsetse species’ | 5.3 × 107 | 0.995 | |
| ‘fly sex’ | 2.2 × 107 | 0.995 | ||
| ‘tsetse species’ × ‘fly sex’ | 8.6 × 10-16 | 0.992 | ||
|
| ‘fly sex’ | 1.9 × 107 | 0.991 |
Note: For the complete dataset the complete model considered before model selection was: prevalence ~ ‘collection site’ + ‘fly sex’ + (‘collection site’ × ‘fly sex’). For the Yankari dataset the complete model considered before model selection was: prevalence ~ ‘tsetse species’ + ‘fly sex’ + (‘tsetse species’ × ‘fly sex’). ×: indicates the interaction between two explanatory variables. Trypanosoma congolense subspp. refers to both T. congolense subspecies combined. P-value: P-value associated with each explanatory variable. Significant results are shown in bold