| Literature DB >> 30470197 |
Stephen Saikiu Shaida1, Judith Sophie Weber2, Thaddeus Terlumun Gbem2,3,4, Sen Claudine Henriette Ngomtcho5, Usman Baba Musa1, Mbunkha Daniel Achukwi6, Mohammed Mamman1, Iliya Shehu Ndams4,7, Jonathan Andrew Nok4,8, Soerge Kelm9.
Abstract
BACKGROUND: Tsetse flies are vectors of trypanosomes, parasites that cause devastating disease in humans and livestock. In the course of vector control programmes it is necessary to know about the Glossina species present in the study area, the population dynamics and the genetic exchange between tsetse fly populations.Entities:
Keywords: COI; Glossina morsitans submorsitans; Glossina palpalis palpalis; Glossina populations; Glossina sp.; Glossina tachinoides; ITS-1
Mesh:
Substances:
Year: 2018 PMID: 30470197 PMCID: PMC6251082 DOI: 10.1186/s12866-018-1293-6
Source DB: PubMed Journal: BMC Microbiol ISSN: 1471-2180 Impact factor: 3.605
GPS coordinates of the base camps of sampling areas in Nigeria (A) and Cameroon (B)
| GPS Coordinates | ||
|---|---|---|
| N | E | |
| A. Nigeria sampling locations- Base Camps | ||
| 1 Yankari Game Reserve | 9° 45.240’ | 10° 30.448’ |
| 2 Kainji Lake National Park | 9° 53.832’ | 3° 59.140’ |
| 3 Old Oyo National Park | 8° 25.051’ | 3° 46.726’ |
| 4 Cross River National Park Akamkpa | 5° 21.829’ | 8° 26.180’ |
| 5 Cross River National Park Butateng | 6° 16.433’ | 9° 07.901’ |
| 6 Ijah Gwari | 9° 18.860’ | 7° 26.814’ |
| B. Cameroon sampling location- Base Camp | ||
| 7 Dodeo Region | 7° 27.994’ | 12° 04.101’ |
Fig. 1Total tsetse fly catches and sex ratio in Nigeria. All trapped tsetse flies regardless whether alive or dead are shown. A. Morphologically identified Glossina species are segregated according to the sampling region. Highest number of fly catches occurred in Yankari Game Reserve, Kainji Lake National Park and Old Oyo National Park (a). Low numbers of tsetse flies were caught in Cross River National Park and from Ijah Gwari (b). B. Sex ratio within the different species. *Two G. p. palpalis were collected in Yankari Game Reserve. **Two G. m. submorsitans from Old Oyo NP were later genetically identified as Glossina sp. ***Tsetse flies morphologically recorded as G. fusca were genetically identified as various Glossina species and were further referred to as Glossina sp. ****Glossina sp. refers to all unidentified Glossina species
Fig. 2Phylogenetic analysis of Glossina sp. field samples (▼) and reference Glossina species by comparison of partial COI sequences. 592 bp stretches of representative samples for each species and sampling spot were compared to sequences obtained from NCBI as described under Methods. Tamura-Nei-93-model assuming gamma distribution and invariant sites was used to construct the tree and was evaluated with 900 bootstrap replicates. Accession numbers of reference sequences are indicated after the species name. EG Equatorial Guinea, CAM Cameroon, CR Cross River National Park
Fig. 3Maximum likelihood tree of partial COI sequences from Glossina sp. field samples. 563 bp stretches of 74 sequences were aligned and analysed as described under Methods to provide an overview of the population diversities in the different sampling sites. Tamura-3-parameter model with gamma distribution with the default setting for number of discrete gamma categories was used to construct the tree and evaluated with 800 bootstrap replicates. Sampling sites are indicated in brackets. Sequences with different positions than in the phylogenetic analysis shown in Fig. 2 are indicated. CAM Cameroon [32]
Fig. 4Geometric wing morphometric analysis of G. p. palpalis wings. (a) The nine landmarks selected for analysis as described previously [37] are indicated on an example wing. Centroid size (b) and principle component analysis of partial warps (c) were analysed as described under Methods. The four groups representing males and females from the Central and West African clades are indicated