Literature DB >> 27206225

Human DNA quantification and sample quality assessment: Developmental validation of the PowerQuant(®) system.

Margaret M Ewing1, Jonelle M Thompson2, Robert S McLaren3, Vincent M Purpero4, Kelli J Thomas5, Patricia A Dobrowski6, Gretchen A DeGroot7, Erica L Romsos8, Douglas R Storts9.   

Abstract

Quantification of the total amount of human DNA isolated from a forensic evidence item is crucial for DNA normalization prior to short tandem repeat (STR) DNA analysis and a federal quality assurance standard requirement. Previous commercial quantification methods determine the total human DNA and total human male DNA concentrations, but provide limited information about the condition of the DNA sample. The PowerQuant(®) System includes targets for quantification of total human and total human male DNA as well as targets for evaluating whether the human DNA is degraded and/or PCR inhibitors are present in the sample. A developmental validation of the PowerQuant(®) System was completed, following SWGDAM Validation Guidelines, to evaluate the assay's specificity, sensitivity, precision and accuracy, as well as the ability to detect degraded DNA or PCR inhibitors. In addition to the total human DNA and total human male DNA concentrations in a sample, data from the degradation target and internal PCR control (IPC) provide a forensic DNA analyst meaningful information about the quality of the isolated human DNA and the presence of PCR inhibitors in the sample that can be used to determine the most effective workflow and assist downstream interpretation.
Copyright © 2016 The Author(s). Published by Elsevier Ireland Ltd.. All rights reserved.

Entities:  

Keywords:  DNA analysis; Forensic science; PowerPlex(®); PowerQuant(®); Quantification; Short tandem repeat (STR); Validation; qPCR

Mesh:

Substances:

Year:  2016        PMID: 27206225     DOI: 10.1016/j.fsigen.2016.04.007

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  9 in total

1.  The importance of forensic storage support: DNA quality from 11-year-old saliva on FTA cards.

Authors:  Beatrice Corradini; Milena Alù; Elena Magnanini; Mathilde Emmanuelle Galinier; Enrico Silingardi
Journal:  Int J Legal Med       Date:  2019-08-28       Impact factor: 2.686

2.  Bone fragment or bone powder? ATR-FTIR spectroscopy-based comparison of chemical composition and DNA preservation of bones after 10 years in a freezer.

Authors:  Irena Zupanič Pajnič; Tamara Leskovar; Ivan Jerman
Journal:  Int J Legal Med       Date:  2021-05-24       Impact factor: 2.686

3.  DNA and RNA profiling of excavated human remains with varying postmortem intervals.

Authors:  M van den Berge; D Wiskerke; R R R Gerretsen; J Tabak; T Sijen
Journal:  Int J Legal Med       Date:  2016-09-14       Impact factor: 2.686

4.  Evaluation of four commercial quantitative real-time PCR kits with inhibited and degraded samples.

Authors:  Amy S Holmes; Rachel Houston; Kyleen Elwick; David Gangitano; Sheree Hughes-Stamm
Journal:  Int J Legal Med       Date:  2017-11-24       Impact factor: 2.686

5.  Comparison of DNA preservation between adult and non-adult ancient skeletons.

Authors:  Ariana Šuligoj; Sara Mesesnel; Tamara Leskovar; Eva Podovšovnik; Irena Zupanič Pajnič
Journal:  Int J Legal Med       Date:  2022-09-01       Impact factor: 2.791

6.  Assessment of autosomal and male DNA extracted from casework samples using Casework Direct Kit, Custom and Maxwell 16 System DNA IQ Casework Pro Kit for autosomal-STR and Y-STR profiling.

Authors:  Hashom Mohd Hakim; Hussein Omar Khan; Siti Afifah Ismail; Shahrizad Ayob; Japareng Lalung; Edward Abban Kofi; Geoffrey Keith Chambers; Hisham Atan Edinur
Journal:  Sci Rep       Date:  2019-10-10       Impact factor: 4.379

7.  An integrated system for forensic DNA testing of sexual assault cases in the Philippines.

Authors:  Jae Joseph Russell B Rodriguez; Rita P Laude; Maria Corazon A De Ungria
Journal:  Forensic Sci Int       Date:  2021-01-11       Impact factor: 2.395

8.  CSYseq: The first Y-chromosome sequencing tool typing a large number of Y-SNPs and Y-STRs to unravel worldwide human population genetics.

Authors:  Sofie Claerhout; Paulien Verstraete; Liesbeth Warnez; Simon Vanpaemel; Maarten Larmuseau; Ronny Decorte
Journal:  PLoS Genet       Date:  2021-09-07       Impact factor: 5.917

9.  Improved resolution of mixed STR profiles using a fully automated differential cell lysis/DNA extraction method.

Authors:  Matthew C Goldstein; Jordan O Cox; Lori B Seman; Tracey Dawson Cruz
Journal:  Forensic Sci Res       Date:  2019-08-20
  9 in total

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