Literature DB >> 2719913

Complete assignment of the hydrogen out-of-plane wagging vibrations of bathorhodopsin: chromophore structure and energy storage in the primary photoproduct of vision.

I Palings1, E M van den Berg, J Lugtenburg, R A Mathies.   

Abstract

Resonance Raman vibrational spectra of the retinal chromophore in bathorhodopsin have been obtained after regenerating bovine visual pigments with an extensive series of 13C- and deuterium-labeled retinals. A low-temperature spinning cell technique was used to produce high-quality bathorhodopsin spectra exhibiting resolved hydrogen out-of-plane wagging vibrations at 838, 850, 858, 875, and 921 cm-1. The isotopic shifts and a normal coordinate analysis permit the assignment of these lines to the HC7 = C8H Bg, C14H, C12H, C10H, and C11H hydrogen out-of-plane wagging modes, respectively. The coupling constant between the C11H and C12H wags as well as the C12H wag force constant are unusually low compared to those of retinal model compounds. This quantitatively confirms the lack of coupling between the C11H and C12H wags and the low C12H wag vibrational frequency noted earlier by Eyring et al. [(1982) Biochemistry 21, 384]. The force constants for the C10H and C14H wags are also significantly below the values observed in model compounds. We suggest that the perturbed hydrogen out-of-plane wagging and C-C stretching force constants for the C10-C11 = C12-C13 region of the chromophore in bathorhodopsin result from electrostatic interactions with a charged protein residue. This interaction may also contribute to the 33 kcal/mol energy storage in bathorhodopsin.

Entities:  

Mesh:

Substances:

Year:  1989        PMID: 2719913     DOI: 10.1021/bi00430a012

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  19 in total

1.  Picosecond dynamics of G-protein coupled receptor activation in rhodopsin from time-resolved UV resonance Raman spectroscopy.

Authors:  Judy E Kim; Duohai Pan; Richard A Mathies
Journal:  Biochemistry       Date:  2003-05-13       Impact factor: 3.162

2.  Fourier transform infrared studies of active-site-methylated rhodopsin. Implications for chromophore-protein interaction, transducin activation, and the reaction pathway.

Authors:  U M Ganter; C Longstaff; M A Pajares; R R Rando; F Siebert
Journal:  Biophys J       Date:  1991-03       Impact factor: 4.033

3.  Resonance Raman Structural Evidence that the Cis-to-Trans Isomerization in Rhodopsin Occurs in Femtoseconds.

Authors:  J E Kim; D W McCamant; L Zhu; R A Mathies
Journal:  J Phys Chem B       Date:  2001-02-15       Impact factor: 2.991

4.  Synthetic Studies in Phytochrome Chemistry.

Authors:  Peter A Jacobi; Imad M Adel Odeh; Subhas C Buddhu; Guolin Cai; Sundaramoorthi Rajeswari; Douglas Fry; Wanjun Zheng; Robert W Desimone; Jiasheng Guo; Lisa D Coutts; Sheila I Hauck; Sam H Leung; Indranath Ghosh; Douglas Pippin
Journal:  Synlett       Date:  2005       Impact factor: 2.454

Review 5.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

6.  Steric constraint in the primary photoproduct of sensory rhodopsin II is a prerequisite for light-signal transfer to HtrII.

Authors:  Motohiro Ito; Yuki Sudo; Yuji Furutani; Takashi Okitsu; Akimori Wada; Michio Homma; John L Spudich; Hideki Kandori
Journal:  Biochemistry       Date:  2008-05-15       Impact factor: 3.162

7.  Transition dipole orientations in the early photolysis intermediates of rhodopsin.

Authors:  J W Lewis; C M Einterz; S J Hug; D S Kliger
Journal:  Biophys J       Date:  1989-12       Impact factor: 4.033

8.  The energetics of the primary proton transfer in bacteriorhodopsin revisited: it is a sequential light-induced charge separation after all.

Authors:  Sonja Braun-Sand; Pankaz K Sharma; Zhen T Chu; Andrei V Pisliakov; Arieh Warshel
Journal:  Biochim Biophys Acta       Date:  2008-03-14

9.  Resonance Raman analysis of the mechanism of energy storage and chromophore distortion in the primary visual photoproduct.

Authors:  Elsa C Y Yan; Ziad Ganim; Manija A Kazmi; Belinda S W Chang; Thomas P Sakmar; Richard A Mathies
Journal:  Biochemistry       Date:  2004-08-31       Impact factor: 3.162

10.  Localization of the retinal protonated Schiff base counterion in rhodopsin.

Authors:  M Han; B S DeDecker; S O Smith
Journal:  Biophys J       Date:  1993-08       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.