Literature DB >> 27184660

A 17-month time course study of human RNA and DNA degradation in body fluids under dry and humid environmental conditions.

Miriam Sirker1, Peter M Schneider2, Iva Gomes2.   

Abstract

Blood, saliva, and semen are some of the forensically most relevant biological stains commonly found at crime scenes, which can often be of small size or challenging due to advanced decay. In this context, it is of great importance to possess reliable knowledge about the effects of degradation under different environmental conditions and to use appropriate methods for retrieving maximal information from limited sample amount. In the last decade, RNA analysis has been demonstrated to be a reliable approach identifying the cell or tissue type of an evidentiary body fluid trace. Hence, messenger RNA (mRNA) profiling is going to be implemented into forensic casework to supplement the routinely performed short tandem repeat (STR) analysis, and therefore, the ability to co-isolate RNA and DNA from the same sample is a prerequisite. The objective of this work was to monitor and compare the degradation process of both nucleic acids for human blood, saliva, and semen stains at three different concentrations, exposed to dry and humid conditions during a 17-month time period. This study also addressed the question whether there are relevant differences in the efficiency of automated, magnetic bead-based single DNA or RNA extraction methods compared to a manually performed co-extraction method using silica columns. Our data show that mRNA, especially from blood and semen, can be recovered over the entire time period surveyed without compromising the success of DNA profiling; mRNA analysis indicates to be a robust and reliable technique to identify the biological source of aged stain material. The co-extraction method appears to provide mRNA and DNA of sufficient quantity and quality for all different forensic investigation procedures. Humidity and accompanied mold formation are detrimental to both nucleic acids.

Entities:  

Keywords:  Body fluid identification; DNA/RNA co-extraction; Degradation; Forensic science; STR profiling; mRNA profiling

Mesh:

Substances:

Year:  2016        PMID: 27184660     DOI: 10.1007/s00414-016-1373-9

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  37 in total

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Authors:  Padraic P Levings; Jörg Bungert
Journal:  Eur J Biochem       Date:  2002-03

2.  A multiplex (m)RNA-profiling system for the forensic identification of body fluids and contact traces.

Authors:  Alexander Lindenbergh; Mirjam de Pagter; Geeta Ramdayal; Mijke Visser; Dmitry Zubakov; Manfred Kayser; Titia Sijen
Journal:  Forensic Sci Int Genet       Date:  2012-02-22       Impact factor: 4.882

3.  mRNA profiling for the identification of blood--results of a collaborative EDNAP exercise.

Authors:  C Haas; E Hanson; W Bär; R Banemann; A M Bento; A Berti; E Borges; C Bouakaze; A Carracedo; M Carvalho; A Choma; M Dötsch; M Durianciková; P Hoff-Olsen; C Hohoff; P Johansen; P A Lindenbergh; B Loddenkötter; B Ludes; O Maroñas; N Morling; H Niederstätter; W Parson; G Patel; C Popielarz; E Salata; P M Schneider; T Sijen; B Sviezená; L Zatkalíková; J Ballantyne
Journal:  Forensic Sci Int Genet       Date:  2010-02-06       Impact factor: 4.882

4.  A method for DNA and RNA co-extraction for use on forensic samples using the Promega DNA IQ™ system.

Authors:  Anna Bowden; Rachel Fleming; SallyAnn Harbison
Journal:  Forensic Sci Int Genet       Date:  2010-01-06       Impact factor: 4.882

5.  The development of a mRNA multiplex RT-PCR assay for the definitive identification of body fluids.

Authors:  Rachel I Fleming; SallyAnn Harbison
Journal:  Forensic Sci Int Genet       Date:  2009-12-14       Impact factor: 4.882

6.  Degraded RNA transcript stable regions (StaRs) as targets for enhanced forensic RNA body fluid identification.

Authors:  Meng-Han Lin; Patricia P Albani; Rachel Fleming
Journal:  Forensic Sci Int Genet       Date:  2015-10-03       Impact factor: 4.882

7.  Comparative evaluation of different extraction and quantification methods for forensic RNA analysis.

Authors:  Melanie Grabmüller; Burkhard Madea; Cornelius Courts
Journal:  Forensic Sci Int Genet       Date:  2015-01-16       Impact factor: 4.882

8.  Comparison of automated and manual purification of total RNA for mRNA-based identification of body fluids.

Authors:  Tomoko Akutsu; Tetsushi Kitayama; Ken Watanabe; Koichi Sakurada
Journal:  Forensic Sci Int Genet       Date:  2014-09-17       Impact factor: 4.882

9.  Messenger RNA profiling: a novel method for body fluid identification by real-time PCR.

Authors:  Christa Nussbaumer; Elisabeth Gharehbaghi-Schnell; Irina Korschineck
Journal:  Forensic Sci Int       Date:  2005-11-09       Impact factor: 2.395

10.  Assessment of DNA damage induced by terrestrial UV irradiation of dried bloodstains: forensic implications.

Authors:  Ashley Hall; Lynn M Sims; Jack Ballantyne
Journal:  Forensic Sci Int Genet       Date:  2013-09-06       Impact factor: 4.882

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  4 in total

1.  Evaluation of the inclusion of circular RNAs in mRNA profiling in forensic body fluid identification.

Authors:  Yaqi Zhang; Baonian Liu; Chengchen Shao; Hongmei Xu; Aimin Xue; Ziqin Zhao; Yiwen Shen; Qiqun Tang; Jianhui Xie
Journal:  Int J Legal Med       Date:  2017-09-25       Impact factor: 2.686

2.  Comprehensive examination of conventional and innovative body fluid identification approaches and DNA profiling of laundered blood- and saliva-stained pieces of cloths.

Authors:  G Kulstein; P Wiegand
Journal:  Int J Legal Med       Date:  2017-09-29       Impact factor: 2.686

3.  Evaluation of the Effects of Different Sample Collection Strategies on DNA/RNA Co-Analysis of Forensic Stains.

Authors:  Daniela Lacerenza; Giorgio Caudullo; Elena Chierto; Serena Aneli; Giancarlo Di Vella; Marco Barberis; Samuele Voyron; Paola Berchialla; Carlo Robino
Journal:  Genes (Basel)       Date:  2022-05-30       Impact factor: 4.141

Review 4.  Current Methods for Body Fluid Identification Related to Sexual Crime: Focusing on Saliva, Semen, and Vaginal Fluid.

Authors:  Koichi Sakurada; Ken Watanabe; Tomoko Akutsu
Journal:  Diagnostics (Basel)       Date:  2020-09-14
  4 in total

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