Literature DB >> 11895428

The human beta-globin locus control region.

Padraic P Levings1, Jörg Bungert.   

Abstract

The human beta-globin gene locus is the subject of intense study, and over the past two decades a wealth of information has accumulated on how tissue-specific and stage-specific expression of its genes is achieved. The data are extensive and it would be difficult, if not impossible, to formulate a comprehensive model integrating every aspect of what is currently known. In this review, we introduce the fundamental characteristics of globin locus regulation as well as questions on which much of the current research is predicated. We then outline a hypothesis that encompasses more recent results, focusing on the modification of higher-order chromatin structure and recruitment of transcription complexes to the globin locus. The essence of this hypothesis is that the locus control region (LCR) is a genetic entity highly accessible to and capable of recruiting, with great efficiency, chromatin-modifying, coactivator, and transcription complexes. These complexes are used to establish accessible chromatin domains, allowing basal factors to be loaded on to specific globin gene promoters in a developmental stage-specific manner. We conceptually divide this process into four steps: (a) generation of a highly accessible LCR holocomplex; (b) recruitment of transcription and chromatin-modifying complexes to the LCR; (c) establishment of chromatin domains permissive for transcription; (d) transfer of transcription complexes to globin gene promoters.

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Year:  2002        PMID: 11895428     DOI: 10.1046/j.1432-1327.2002.02797.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  56 in total

1.  Characterization of the human beta-globin downstream promoter region.

Authors:  Kelly M Leach; Karen F Vieira; Sung-Hae Lee Kang; Ara Aslanian; Martin Teichmann; Robert G Roeder; Jörg Bungert
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

2.  Formation of a tissue-specific histone acetylation pattern by the hematopoietic transcription factor GATA-1.

Authors:  Danielle L Letting; Carrie Rakowski; Mitchell J Weiss; Gerd A Blobel
Journal:  Mol Cell Biol       Date:  2003-02       Impact factor: 4.272

3.  Recruitment of transcription complexes to the beta-globin gene locus in vivo and in vitro.

Authors:  Karen F Vieira; Padraic P Levings; Meredith A Hill; Valerie J Crusselle; Sung-Hae Lee Kang; James Douglas Engel; Jörg Bungert
Journal:  J Biol Chem       Date:  2004-09-22       Impact factor: 5.157

4.  USF and NF-E2 cooperate to regulate the recruitment and activity of RNA polymerase II in the beta-globin gene locus.

Authors:  Zhuo Zhou; Xingguo Li; Changwang Deng; Paul A Ney; Suming Huang; Jörg Bungert
Journal:  J Biol Chem       Date:  2010-03-17       Impact factor: 5.157

5.  A novel application of real-time RT-LAMP for body fluid identification: using HBB detection as the model.

Authors:  Chih-Wen Su; Chiao-Yun Li; James Chun-I Lee; Dar-Der Ji; Shu-Ying Li; Barbara Daniel; Denise Syndercombe-Court; Adrian Linacre; Hsing-Mei Hsieh
Journal:  Forensic Sci Med Pathol       Date:  2015-04-16       Impact factor: 2.007

Review 6.  Phase Separation and Transcription Regulation: Are Super-Enhancers and Locus Control Regions Primary Sites of Transcription Complex Assembly?

Authors:  Aishwarya Gurumurthy; Yong Shen; Eliot M Gunn; Jörg Bungert
Journal:  Bioessays       Date:  2018-11-30       Impact factor: 4.345

7.  Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF form a chromatin remodeling complex at the beta-globin locus control region.

Authors:  Milind C Mahajan; Geeta J Narlikar; Gokul Boyapaty; Robert E Kingston; Sherman M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-10       Impact factor: 11.205

8.  Synergistic and additive properties of the beta-globin locus control region (LCR) revealed by 5'HS3 deletion mutations: implication for LCR chromatin architecture.

Authors:  Xiangdong Fang; Jin Sun; Ping Xiang; Man Yu; Patrick A Navas; Kenneth R Peterson; George Stamatoyannopoulos; Qiliang Li
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

9.  Rapid Screening for Deleted Form of β-thalassemia by Real-Time Quantitative PCR.

Authors:  Liang-Yin Ke; Jan-Gowth Chang; Chao-Sung Chang; Li-Ling Hsieh; Ta-Chih Liu
Journal:  J Clin Lab Anal       Date:  2016-08-16       Impact factor: 2.352

10.  Lack of Pwcr1/MBII-85 snoRNA is critical for neonatal lethality in Prader-Willi syndrome mouse models.

Authors:  Feng Ding; Yelena Prints; Madhu S Dhar; Dabney K Johnson; Carmen Garnacho-Montero; Robert D Nicholls; Uta Francke
Journal:  Mamm Genome       Date:  2005-06       Impact factor: 2.957

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