Literature DB >> 27101578

Weak and Transient Protein Interactions Determined by Solid-State NMR.

Hugh R W Dannatt1, Michele Felletti1, Stefan Jehle1, Yao Wang2, Lyndon Emsley1,3, Nicholas E Dixon2, Anne Lesage1, Guido Pintacuda4.   

Abstract

Despite their roles in controlling many cellular processes, weak and transient interactions between large structured macromolecules and disordered protein segments cannot currently be characterized at atomic resolution by X-ray crystallography or solution NMR. Solid-state NMR does not suffer from the molecular size limitations affecting solution NMR, and it can be applied to molecules in different aggregation states, including non-crystalline precipitates and sediments. A solid-state NMR approach based on high magnetic fields, fast magic-angle sample spinning, and deuteration provides chemical-shift and relaxation mapping that enabled the characterization of the structure and dynamics of the transient association between two regions in an 80 kDa protein assembly. This led to direct verification of a mechanism of regulation of E. coli DNA metabolism.
© 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA replication; magic angle spinning; protein structure; protein-protein interactions; solid-state NMR

Year:  2016        PMID: 27101578     DOI: 10.1002/anie.201511609

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  12 in total

1.  Expanding the horizons for structural analysis of fully protonated protein assemblies by NMR spectroscopy at MAS frequencies above 100 kHz.

Authors:  Jochem Struppe; Caitlin M Quinn; Manman Lu; Mingzhang Wang; Guangjin Hou; Xingyu Lu; Jodi Kraus; Loren B Andreas; Jan Stanek; Daniela Lalli; Anne Lesage; Guido Pintacuda; Werner Maas; Angela M Gronenborn; Tatyana Polenova
Journal:  Solid State Nucl Magn Reson       Date:  2017-07-03       Impact factor: 2.293

2.  Glutamate promotes SSB protein-protein Interactions via intrinsically disordered regions.

Authors:  Alexander G Kozlov; Min Kyung Shinn; Elizabeth A Weiland; Timothy M Lohman
Journal:  J Mol Biol       Date:  2017-08-03       Impact factor: 5.469

3.  Imaging Membrane Order and Dynamic Interactions in Living Cells with a DNA Zipper Probe.

Authors:  Yousef Bagheri; Ahsan Ausaf Ali; Puspam Keshri; James Chambers; Anne Gershenson; Mingxu You
Journal:  Angew Chem Int Ed Engl       Date:  2021-12-22       Impact factor: 15.336

4.  Integrative structure determination of histones H3 and H4 using genetic interactions.

Authors:  Ignacia Echeverria; Hannes Braberg; Nevan J Krogan; Andrej Sali
Journal:  FEBS J       Date:  2022-03-17       Impact factor: 5.622

Review 5.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

Authors:  Tanguy Le Marchand; Tobias Schubeis; Marta Bonaccorsi; Piotr Paluch; Daniela Lalli; Andrew J Pell; Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Guido Pintacuda
Journal:  Chem Rev       Date:  2022-05-10       Impact factor: 72.087

Review 6.  Methods for Physical Characterization of Phase-Separated Bodies and Membrane-less Organelles.

Authors:  Diana M Mitrea; Bappaditya Chandra; Mylene C Ferrolino; Eric B Gibbs; Michele Tolbert; Michael R White; Richard W Kriwacki
Journal:  J Mol Biol       Date:  2018-07-24       Impact factor: 5.469

7.  Dynamic Structural Changes and Thermodynamics in Phase Separation Processes of an Intrinsically Disordered-Ordered Protein Model.

Authors:  Steffen Lüdeke; Philipp Lohner; Lara G Stühn; Martin U Betschart; Matthias C Huber; Andreas Schreiber; Stefan M Schiller
Journal:  Angew Chem Int Ed Engl       Date:  2021-12-06       Impact factor: 16.823

8.  Site-Specific Studies of Nucleosome Interactions by Solid-State NMR Spectroscopy.

Authors:  ShengQi Xiang; Ulric B le Paige; Velten Horn; Klaartje Houben; Marc Baldus; Hugo van Ingen
Journal:  Angew Chem Int Ed Engl       Date:  2018-03-13       Impact factor: 15.336

9.  Rapid access to RNA resonances by proton-detected solid-state NMR at >100 kHz MAS.

Authors:  Alexander Marchanka; Jan Stanek; Guido Pintacuda; Teresa Carlomagno
Journal:  Chem Commun (Camb)       Date:  2018-07-05       Impact factor: 6.222

10.  1 H-Detected Solid-State NMR Studies of Water-Inaccessible Proteins In Vitro and In Situ.

Authors:  João Medeiros-Silva; Deni Mance; Mark Daniëls; Shehrazade Jekhmane; Klaartje Houben; Marc Baldus; Markus Weingarth
Journal:  Angew Chem Int Ed Engl       Date:  2016-09-27       Impact factor: 15.336

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