Literature DB >> 27100743

A critical role for topoisomerase IIb and DNA double strand breaks in transcription.

Stuart K Calderwood1.   

Abstract

Recent studies have indicated a novel role for topoisomerase IIb in transcription. Transcription of heat shock genes, serum-induced immediate early genes and nuclear receptor-activated genes, each required DNA double strands generated by topoisomerase IIb. Such strand breaks seemed both necessary and sufficient for transcriptional activation. In addition, such transcription was associated with initiation of the DNA damage response pathways, including the activation of the enzymes: ataxia-telangiectasia mutated (ATM), DNA-dependent protein kinase and poly (ADP ribose) polymerase 1. DNA damage response signaling was involved both in transcription and in repair of DNA breaks generated by topoisomerase IIb.

Entities:  

Keywords:  ATM; DNA-PK; PARP1; PIKK kinase; strand break; topoisomerase II; transcripton

Mesh:

Substances:

Year:  2016        PMID: 27100743      PMCID: PMC4984685          DOI: 10.1080/21541264.2016.1181142

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  62 in total

1.  A topoisomerase IIbeta-mediated dsDNA break required for regulated transcription.

Authors:  Bong-Gun Ju; Victoria V Lunyak; Valentina Perissi; Ivan Garcia-Bassets; David W Rose; Christopher K Glass; Michael G Rosenfeld
Journal:  Science       Date:  2006-06-23       Impact factor: 47.728

2.  KAP-1 phosphorylation regulates CHD3 nucleosome remodeling during the DNA double-strand break response.

Authors:  Aaron A Goodarzi; Thomas Kurka; Penelope A Jeggo
Journal:  Nat Struct Mol Biol       Date:  2011-06-05       Impact factor: 15.369

3.  A novel function of poly(ADP-ribosyl)ation: silencing of RNA polymerase II-dependent transcription.

Authors:  S L Oei; J Griesenbeck; M Ziegler; M Schweiger
Journal:  Biochemistry       Date:  1998-02-10       Impact factor: 3.162

4.  Estrogen receptor α-mediated transcription induces cell cycle-dependent DNA double-strand breaks.

Authors:  Laura M Williamson; Susan P Lees-Miller
Journal:  Carcinogenesis       Date:  2010-11-26       Impact factor: 4.944

Review 5.  The MRE11 complex: starting from the ends.

Authors:  Travis H Stracker; John H J Petrini
Journal:  Nat Rev Mol Cell Biol       Date:  2011-02       Impact factor: 94.444

6.  Poly(ADP-ribose) polymerase (PARP-1) has a controlling role in homologous recombination.

Authors:  Niklas Schultz; Elena Lopez; Nasrollah Saleh-Gohari; Thomas Helleday
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

Review 7.  The biogenesis of chromosome translocations.

Authors:  Vassilis Roukos; Tom Misteli
Journal:  Nat Cell Biol       Date:  2014-04       Impact factor: 28.824

8.  Topology of a DNA G-quadruplex structure formed in the HIV-1 promoter: a potential target for anti-HIV drug development.

Authors:  Samir Amrane; Abdelaziz Kerkour; Amina Bedrat; Brune Vialet; Marie-Line Andreola; Jean-Louis Mergny
Journal:  J Am Chem Soc       Date:  2014-03-27       Impact factor: 15.419

9.  C-terminal regions of topoisomerase IIalpha and IIbeta determine isoform-specific functioning of the enzymes in vivo.

Authors:  René M Linka; Andrew C G Porter; Arsen Volkov; Christian Mielke; Fritz Boege; Morten O Christensen
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971

10.  TRIM28 regulates RNA polymerase II promoter-proximal pausing and pause release.

Authors:  Heeyoun Bunch; Xiaofeng Zheng; Adam Burkholder; Simon T Dillon; Shmulik Motola; Gabriel Birrane; Christopher C Ebmeier; Stuart Levine; David Fargo; Guang Hu; Dylan J Taatjes; Stuart K Calderwood
Journal:  Nat Struct Mol Biol       Date:  2014-08-31       Impact factor: 15.369

View more
  16 in total

1.  Genome Organization Drives Chromosome Fragility.

Authors:  Andres Canela; Yaakov Maman; Seolkyoung Jung; Nancy Wong; Elsa Callen; Amanda Day; Kyong-Rim Kieffer-Kwon; Aleksandra Pekowska; Hongliang Zhang; Suhas S P Rao; Su-Chen Huang; Peter J Mckinnon; Peter D Aplan; Yves Pommier; Erez Lieberman Aiden; Rafael Casellas; André Nussenzweig
Journal:  Cell       Date:  2017-07-20       Impact factor: 41.582

Review 2.  DNA double-strand breaks as drivers of neural genomic change, function, and disease.

Authors:  Frederick W Alt; Bjoern Schwer
Journal:  DNA Repair (Amst)       Date:  2018-08-23

3.  Anchoring Chromatin Loops to Cancer.

Authors:  Faith Fowler; Jessica K Tyler
Journal:  Dev Cell       Date:  2017-08-07       Impact factor: 12.270

4.  The DNA Repair-Associated Protein Gadd45γ Regulates the Temporal Coding of Immediate Early Gene Expression within the Prelimbic Prefrontal Cortex and Is Required for the Consolidation of Associative Fear Memory.

Authors:  Xiang Li; Paul R Marshall; Laura J Leighton; Esmi L Zajaczkowski; Ziqi Wang; Sachithrani U Madugalle; Jiayu Yin; Timothy W Bredy; Wei Wei
Journal:  J Neurosci       Date:  2018-12-13       Impact factor: 6.167

5.  RNA-DNA strand exchange by the Drosophila Polycomb complex PRC2.

Authors:  Célia Alecki; Victoria Chiwara; Lionel A Sanz; Daniel Grau; Osvaldo Arias Pérez; Elodie L Boulier; Karim-Jean Armache; Frédéric Chédin; Nicole J Francis
Journal:  Nat Commun       Date:  2020-04-14       Impact factor: 14.919

Review 6.  Transcribing malignancy: transcription-associated genomic instability in cancer.

Authors:  B Boulianne; N Feldhahn
Journal:  Oncogene       Date:  2017-11-06       Impact factor: 9.867

Review 7.  Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss.

Authors:  Gayle B Collin; Navdeep Gogna; Bo Chang; Nattaya Damkham; Jai Pinkney; Lillian F Hyde; Lisa Stone; Jürgen K Naggert; Patsy M Nishina; Mark P Krebs
Journal:  Cells       Date:  2020-04-10       Impact factor: 7.666

8.  Senataxin resolves RNA:DNA hybrids forming at DNA double-strand breaks to prevent translocations.

Authors:  Sarah Cohen; Nadine Puget; Yea-Lih Lin; Thomas Clouaire; Marion Aguirrebengoa; Vincent Rocher; Philippe Pasero; Yvan Canitrot; Gaëlle Legube
Journal:  Nat Commun       Date:  2018-02-07       Impact factor: 14.919

Review 9.  Programmed DNA Damage and Physiological DSBs: Mapping, Biological Significance and Perturbations in Disease States.

Authors:  Sara Oster; Rami I Aqeilan
Journal:  Cells       Date:  2020-08-10       Impact factor: 6.600

Review 10.  Tetrahymena meiosis: Simple yet ingenious.

Authors:  Josef Loidl
Journal:  PLoS Genet       Date:  2021-07-15       Impact factor: 5.917

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.