Literature DB >> 29106394

Transcribing malignancy: transcription-associated genomic instability in cancer.

B Boulianne1, N Feldhahn1.   

Abstract

Transcription is an essential process in all living cells. However, transcription also sensitises genomic DNA to damage from a number of endogenous sources. Although various mechanisms protect the integrity of DNA during transcription, transcription-associated genomic instability occurs in normal and malignant cells and, if unrepaired, can result in genomic alterations. Numerous studies have implicated genomic alterations found in cancer genomes to transcription. Hence, transcription-associated genomic instability can be considered as a major driver of cancer development. In this review, we summarise the body of knowledge on transcription-associated genomic instability and highlight recent discoveries in the field on both healthy and malignant cells. We also discuss how transcription-associated DNA damage might promote transforming lesions at cell type- and lineage-specific genes.

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Year:  2017        PMID: 29106394     DOI: 10.1038/onc.2017.402

Source DB:  PubMed          Journal:  Oncogene        ISSN: 0950-9232            Impact factor:   9.867


  205 in total

1.  Cotranscriptionally formed DNA:RNA hybrids mediate transcription elongation impairment and transcription-associated recombination.

Authors:  Pablo Huertas; Andrés Aguilera
Journal:  Mol Cell       Date:  2003-09       Impact factor: 17.970

2.  Characterization of monoclonal antibody to DNA.RNA and its application to immunodetection of hybrids.

Authors:  S J Boguslawski; D E Smith; M A Michalak; K E Mickelson; C O Yehle; W L Patterson; R J Carrico
Journal:  J Immunol Methods       Date:  1986-05-01       Impact factor: 2.303

3.  Two familial ALS proteins function in prevention/repair of transcription-associated DNA damage.

Authors:  Sarah J Hill; Daniel A Mordes; Lisa A Cameron; Donna S Neuberg; Serena Landini; Kevin Eggan; David M Livingston
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-14       Impact factor: 11.205

Review 4.  Lessons from the cancer genome.

Authors:  Levi A Garraway; Eric S Lander
Journal:  Cell       Date:  2013-03-28       Impact factor: 41.582

5.  The BCL11B tumor suppressor is mutated across the major molecular subtypes of T-cell acute lymphoblastic leukemia.

Authors:  Alejandro Gutierrez; Alex Kentsis; Takaomi Sanda; Linda Holmfeldt; Shann-Ching Chen; Jianhua Zhang; Alexei Protopopov; Lynda Chin; Suzanne E Dahlberg; Donna S Neuberg; Lewis B Silverman; Stuart S Winter; Stephen P Hunger; Stephen E Sallan; Shan Zha; Frederick W Alt; James R Downing; Charles G Mullighan; A Thomas Look
Journal:  Blood       Date:  2011-08-30       Impact factor: 22.113

6.  The BCL6 proto-oncogene suppresses p53 expression in germinal-centre B cells.

Authors:  Ryan T Phan; Riccardo Dalla-Favera
Journal:  Nature       Date:  2004-12-02       Impact factor: 49.962

7.  Two levels of protection for the B cell genome during somatic hypermutation.

Authors:  Man Liu; Jamie L Duke; Daniel J Richter; Carola G Vinuesa; Christopher C Goodnow; Steven H Kleinstein; David G Schatz
Journal:  Nature       Date:  2008-02-14       Impact factor: 49.962

8.  The TLX1 oncogene drives aneuploidy in T cell transformation.

Authors:  Kim De Keersmaecker; Pedro J Real; Giusy Della Gatta; Teresa Palomero; Maria Luisa Sulis; Valeria Tosello; Pieter Van Vlierberghe; Kelly Barnes; Mireia Castillo; Xavier Sole; Michael Hadler; Jack Lenz; Peter D Aplan; Michelle Kelliher; Barbara L Kee; Pier Paolo Pandolfi; Dietmar Kappes; Fotini Gounari; Howard Petrie; Joni Van der Meulen; Frank Speleman; Elisabeth Paietta; Janis Racevskis; Peter H Wiernik; Jacob M Rowe; Jean Soulier; David Avran; Hélène Cavé; Nicole Dastugue; Susana Raimondi; Jules P P Meijerink; Carlos Cordon-Cardo; Andrea Califano; Adolfo A Ferrando
Journal:  Nat Med       Date:  2010-10-24       Impact factor: 53.440

9.  B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity.

Authors:  Jason Qian; Qiao Wang; Marei Dose; Nathanael Pruett; Kyong-Rim Kieffer-Kwon; Wolfgang Resch; Genqing Liang; Zhonghui Tang; Ewy Mathé; Christopher Benner; Wendy Dubois; Steevenson Nelson; Laura Vian; Thiago Y Oliveira; Mila Jankovic; Ofir Hakim; Anna Gazumyan; Rushad Pavri; Parirokh Awasthi; Bin Song; Geng Liu; Longyun Chen; Shida Zhu; Lionel Feigenbaum; Louis Staudt; Cornelis Murre; Yijun Ruan; Davide F Robbiani; Qiang Pan-Hammarström; Michel C Nussenzweig; Rafael Casellas
Journal:  Cell       Date:  2014-12-04       Impact factor: 41.582

10.  DSBCapture: in situ capture and sequencing of DNA breaks.

Authors:  Stefanie V Lensing; Giovanni Marsico; Robert Hänsel-Hertsch; Enid Y Lam; David Tannahill; Shankar Balasubramanian
Journal:  Nat Methods       Date:  2016-08-15       Impact factor: 28.547

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  11 in total

Review 1.  R-loop generation during transcription: Formation, processing and cellular outcomes.

Authors:  Boris P Belotserkovskii; Silvia Tornaletti; Alicia D D'Souza; Philip C Hanawalt
Journal:  DNA Repair (Amst)       Date:  2018-08-25

2.  SSB1/SSB2 Proteins Safeguard B Cell Development by Protecting the Genomes of B Cell Precursors.

Authors:  Matthias Pfeifer; Reto Brem; Timothy P Lippert; Bryant Boulianne; Howin Ng Ho; Mark E Robinson; Justin Stebbing; Niklas Feldhahn
Journal:  J Immunol       Date:  2019-05-13       Impact factor: 5.422

3.  Breakage-Fusion-Bridge Events Trigger Complex Genome Rearrangements and Amplifications in Developmentally Arrested T Cell Lymphomas.

Authors:  Joy J Bianchi; Valentine Murigneux; Marie Bedora-Faure; Chloé Lescale; Ludovic Deriano
Journal:  Cell Rep       Date:  2019-06-04       Impact factor: 9.423

Review 4.  The Aging Stress Response and Its Implication for AMD Pathogenesis.

Authors:  Janusz Blasiak; Elzbieta Pawlowska; Anna Sobczuk; Joanna Szczepanska; Kai Kaarniranta
Journal:  Int J Mol Sci       Date:  2020-11-22       Impact factor: 5.923

5.  Gene Instability-Related lncRNA Prognostic Model of Melanoma Patients via Machine Learning Strategy.

Authors:  Kexin Yan; Yutao Wang; Yining Shao; Ting Xiao
Journal:  J Oncol       Date:  2021-05-25       Impact factor: 4.375

Review 6.  The abscopal effect: a sense of DNA damage is in the air.

Authors:  Timothy P Lippert; Roger A Greenberg
Journal:  J Clin Invest       Date:  2021-05-03       Impact factor: 19.456

7.  Frequent mutation of the FOXA1 untranslated region in prostate cancer.

Authors:  Matti Annala; Sinja Taavitsainen; Gillian Vandekerkhove; Jack V W Bacon; Kevin Beja; Kim N Chi; Matti Nykter; Alexander W Wyatt
Journal:  Commun Biol       Date:  2018-08-24

8.  Transcription-dependent DNA double-strand breaks and human disease.

Authors:  Agnese Cristini; Natalia Gromak; Olivier Sordet
Journal:  Mol Cell Oncol       Date:  2020-01-10

Review 9.  Cellular Stress Responses in Radiotherapy.

Authors:  Wanyeon Kim; Sungmin Lee; Danbi Seo; Dain Kim; Kyeongmin Kim; EunGi Kim; JiHoon Kang; Ki Moon Seong; HyeSook Youn; BuHyun Youn
Journal:  Cells       Date:  2019-09-18       Impact factor: 6.600

Review 10.  Cell organelles as targets of mammalian cadmium toxicity.

Authors:  Wing-Kee Lee; Frank Thévenod
Journal:  Arch Toxicol       Date:  2020-03-23       Impact factor: 5.153

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