| Literature DB >> 27081373 |
Eugenia Peresypkina1, Alexander Virovets1, Manfred Scheer2.
Abstract
For the first time, the concept of supramolecular synthons was applied to giant rigid superspheres based on pentaphosphaferrocene [CpRFe(η5-P5)] (R = Me, Et) and Cu(I) halides, which reach 2.1-3.0 nm in diameter. Two supramolecular synthons, σ-π and π-π, are discovered based on halogen···CpR and Cp*···Cp* specific interactions, respectively. The geometry of the synthons is reproducible in a series of crystal structures of various supramolecules. The σ-π synthon alone is realized more frequently for Br-containing superspheres. A combination of the σ-π and π-π synthons is more typical for Cl-containing supramolecules. Each supramolecule can bear up to nine synthons to give mostly 2D and 3D architectures.Entities:
Year: 2016 PMID: 27081373 PMCID: PMC4827143 DOI: 10.1021/acs.cgd.6b00136
Source DB: PubMed Journal: Cryst Growth Des ISSN: 1528-7483 Impact factor: 4.076
Supramolecular Synthons in 1a- and 1b-Based Supramolecules
| compound | synthon | d1, Å | φ1, deg | d2, Å | φ2, deg | ref | |
|---|---|---|---|---|---|---|---|
| ( | 4(σ–π) | 3.21–3.39 | 162.5–175.8 | ( | |||
| ( | 4(σ–π) | 3.24–3.50 | 162.4–173.3 | ( | |||
| Cp2Fe@[( | ( | ||||||
| CpCrAs5@[( | ( | ||||||
| [ | 4(σ–π) | 3.30–3.38 | 165.0–177.7 | ( | |||
| [ | 6(σ–π) | 3.31–3.42 | 166.0–176.8 | ( | |||
| [ | 6(σ–π) | 3.29–3.95 | 162.4–168.1 | ( | |||
| [(CpCr)2As5]@[( | 6(σ–π) | 3.32–3.44 | 166.1–176.2 | ( | |||
| [ | 7(σ–π), 2(dbl σ–π) | 3.51–3.70, | 168.0–175.9, | ( | |||
| 3.83–3.85 | 171.6–171.9 | ||||||
| [ | 4(σ–π), 2(π–π) | 3.31–3.56 | 163.8–172.7 | 3.72 | 154.2 | ( | |
| [ | 4(σ–π), 3/2(π–π) | 3.25–3.40 | 160.5–173.7 | 3.30–3.60 | 129.0–153.8 | ( | |
| [ | 2(σ–π), 2(π–π) | 3.20 | 163.1 | 5.26 | 180.0 | ( | |
| [ | 2(σ–π), 6(π–π) | 3.16–3.85 | 154.6–180 | 3.58 | 168.8 | ( | |
| [Cu(MeCN)4]+[( | 7/5(σ–π) | 3.18–3.77 | 160.0–177.9 | 3.44–3.70 | 140.0–173.4 | ( | |
| [ | 8(σ–π), 4(π–π) | 3.33–3.41 | 159.1–160.1 | 3.42–3.60 | 161.3–175.1 | ( | |
| C60@[( | 4(σ–π) | 3.63 | 154.1 | ( |
The distance (X···Cp*) between the center of a C5 ring and a halide (X = Cl, Br) of the neighboring supramolecules.
The angle (∠Cu-X···Cp*) between the center of a C5 ring and the direction of a CuX bond (X = Cl, Br) of the neighboring supramolecules.
The distance (Cp*···Cp*) between the centers of the C5 ring (Cp*···Cp*) of the neighboring supramolecules, Å.
The angle (∠Fe-Cp*···Cp*) between the direction of an Fe-Cp* π-bond and the center of the neighboring C5 ring (see Figure ).
The fractional number corresponds to the number of synthons (when different) per crystallographically unique molecule. For more detail, see Table S2 in the Supporting Information.
The center of the Cu···Cu bond is taken instead of Cu to measure d1 and φ1 for the bridging X = Cl atom.
Figure 1Supramolecules 2–5 based on 1a and 1b.
Figure 2Minimal angles τ between Cp* and X functional groups (rays 1–4) for a fragment with fullerene topology of 2–4 (see Table 1S).
Figure 3Inorganic scaffolds of 2–5 and corresponding supramolecular synthons: σ–π in superspheres (a) 2 and (d) 5, (b) double σ–π synthon in 3e, and (c) π–π synthon in 4.
Figure 4Supramolecular architectures based on the σ–π supramolecular synthon.
Synthon-Based Motifs in the Structures of Supramolecules 2–5
| topology
based on synthon | ||||
|---|---|---|---|---|
| D | N | σ–π | π–π | σ–π + π–π |
| 1D | zigzag chain | linear chain | 2,4C5 | |
| 2D | kgm (2D) | kgm | ||
| sql (2D) | sql | |||
| sql (2D) | sql | |||
| 3D | pcu (3D) | pcu | ||
| pcu (3D) | pcu | |||
| ncj (3D) | ncj | |||
| sql (2D) | zigzag chain | pcu | ||
| sql (2D) | band | 6,7T2 | ||
| linear chain | hxl | hex | ||
| 5,7T8 (3D) | linear chain | 7,7-c | ||
| bcu (3D) | sql | fcu | ||
Dimensionality of architecture based on both σ–π and π–π synthons.
Topological symbols determined according to ToposPro based on notations,[44,45] as resulting from σ–π synthons, π–π synthons, and from both types of synthons.
The topological motif is not listed in the ToposPro database.[45]
Figure 5Supramolecular assemblies based on the (a, b) σ–π or (c, d) π–π synthons: (a) Kagome pattern in 2a, (b) square layer in 3a, (c) band in 3g, and (d) trigonal layer in 3i.
Figure 63D supramolecular architectures built on σ–π and π–π supramolecular synthons. Dark and light edges correspond to the σ–π and the π–π synthons, respectively.
Figure 7Connectivity of (a) 2D [(Cp*FeP5) (CuI)] polymer and (b) interlayer σ–π synthons based on I···Cp* interactions.