Literature DB >> 19382751

Consistent van der Waals radii for the whole main group.

Manjeera Mantina1, Adam C Chamberlin, Rosendo Valero, Christopher J Cramer, Donald G Truhlar.   

Abstract

Atomic radii are not precisely defined but are nevertheless widely used parameters in modeling and understanding molecular structure and interactions. The van der Waals radii determined by Bondi from molecular crystals and data for gases are the most widely used values, but Bondi recommended radius values for only 28 of the 44 main-group elements in the periodic table. In the present Article, we present atomic radii for the other 16; these new radii were determined in a way designed to be compatible with Bondi's scale. The method chosen is a set of two-parameter correlations of Bondi's radii with repulsive-wall distances calculated by relativistic coupled-cluster electronic structure calculations. The newly determined radii (in A) are Be, 1.53; B, 1.92; Al, 1.84; Ca, 2.31; Ge, 2.11; Rb, 3.03; Sr, 2.49; Sb, 2.06; Cs, 3.43; Ba, 2.68; Bi, 2.07; Po, 1.97; At, 2.02; Rn, 2.20; Fr, 3.48; and Ra, 2.83.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19382751      PMCID: PMC3658832          DOI: 10.1021/jp8111556

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  9 in total

1.  Self-Consistent Reaction Field Model for Aqueous and Nonaqueous Solutions Based on Accurate Polarized Partial Charges.

Authors:  Aleksandr V Marenich; Ryan M Olson; Casey P Kelly; Christopher J Cramer; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2007-11       Impact factor: 6.006

2.  Polarization Effects in Aqueous and Nonaqueous Solutions.

Authors:  Aleksandr V Marenich; Ryan M Olson; Adam C Chamberlin; Christopher J Cramer; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2007-11       Impact factor: 6.006

3.  Systematically convergent basis sets for transition metals. I. All-electron correlation consistent basis sets for the 3d elements Sc-Zn.

Authors:  Nikolai B Balabanov; Kirk A Peterson
Journal:  J Chem Phys       Date:  2005-08-08       Impact factor: 3.488

4.  Quantum mechanical size and steric hindrance.

Authors:  Joshua W Hollett; Aaron Kelly; Raymond A Poirier
Journal:  J Phys Chem A       Date:  2006-12-28       Impact factor: 2.781

5.  Variable atomic radii for continuum-solvent electrostatics calculation.

Authors:  Baojing Zhou; Manish Agarwal; Chung F Wong
Journal:  J Chem Phys       Date:  2008-07-07       Impact factor: 3.488

6.  Covalent radii revisited.

Authors:  Beatriz Cordero; Verónica Gómez; Ana E Platero-Prats; Marc Revés; Jorge Echeverría; Eduard Cremades; Flavia Barragán; Santiago Alvarez
Journal:  Dalton Trans       Date:  2008-04-07       Impact factor: 4.390

7.  Benchmarking approximate density functional theory for s/d excitation energies in 3d transition metal cations.

Authors:  Nathan E Schultz; Yan Zhao; Donald G Truhlar
Journal:  J Comput Chem       Date:  2008-01-30       Impact factor: 3.376

8.  Relativistic electronic-structure calculations employing a two-component no-pair formalism with external-field projection operators.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1986-06

9.  Charge Model 4 and Intramolecular Charge Polarization.

Authors:  Ryan M Olson; Aleksandr V Marenich; Christopher J Cramer; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2007-11       Impact factor: 6.006

  9 in total
  101 in total

1.  A Density Functional Theory Evaluation of Hydrophobic Solvation: Ne, Ar and Kr in a 50-Water Cluster. Implications for the Hydrophobic Effect.

Authors:  Nadya Kobko; Mateusz Marianski; Amparo Asensio; Robert Wieczorek; J J Dannenberg
Journal:  Comput Theor Chem       Date:  2011-11-22       Impact factor: 1.926

2.  Cationic 1,2-Azaborine Adducts of Trimethylphosphine, Triphenylphosphine oxide, and Pyridine-N-oxide.

Authors:  Adam J V Marwitz; Jesse T Jenkins; Lev N Zakharov; Shih-Yuan Liu
Journal:  Organometallics       Date:  2011-01-10       Impact factor: 3.876

3.  Furoates and thenoates inhibit pyruvate dehydrogenase kinase 2 allosterically by binding to its pyruvate regulatory site.

Authors:  Tiziana Masini; Barbara Birkaya; Simon van Dijk; Milon Mondal; Johan Hekelaar; Manuel Jäger; Anke C Terwisscha van Scheltinga; Mulchand S Patel; Anna K H Hirsch; Edelmiro Moman
Journal:  J Enzyme Inhib Med Chem       Date:  2016-07-19       Impact factor: 5.051

4.  The importance of being bonded.

Authors:  Henry S Rzepa
Journal:  Nat Chem       Date:  2009-10       Impact factor: 24.427

5.  D+: software for high-resolution hierarchical modeling of solution X-ray scattering from complex structures.

Authors:  Avi Ginsburg; Tal Ben-Nun; Roi Asor; Asaf Shemesh; Lea Fink; Roee Tekoah; Yehonatan Levartovsky; Daniel Khaykelson; Raviv Dharan; Amos Fellig; Uri Raviv
Journal:  J Appl Crystallogr       Date:  2019-02-01       Impact factor: 3.304

6.  A Priori Intrinsic PTM Size Parameters for Predicting the Ion Mobilities of Modified Peptides.

Authors:  Julia L Kaszycki; Alexandre A Shvartsburg
Journal:  J Am Soc Mass Spectrom       Date:  2016-12-14       Impact factor: 3.109

7.  Visualizing atomic sizes and molecular shapes with the classical turning surface of the Kohn-Sham potential.

Authors:  Egor Ospadov; Jianmin Tao; Viktor N Staroverov; John P Perdew
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-21       Impact factor: 11.205

8.  A two-coordinate boron cation featuring C-B+-C bonding.

Authors:  Yoshiaki Shoji; Naoki Tanaka; Koichiro Mikami; Masanobu Uchiyama; Takanori Fukushima
Journal:  Nat Chem       Date:  2014-05-11       Impact factor: 24.427

9.  Polarizable embedding for simulating redox potentials of biomolecules.

Authors:  Ruslan N Tazhigulov; Pradeep Kumar Gurunathan; Yongbin Kim; Lyudmila V Slipchenko; Ksenia B Bravaya
Journal:  Phys Chem Chem Phys       Date:  2019-06-05       Impact factor: 3.676

10.  Synthesis and characterization of a series of structurally and electronically diverse Fe(II) complexes featuring a family of triphenylamido-amine ligands.

Authors:  Patrina Paraskevopoulou; Lin Ai; Qiuwen Wang; Devender Pinnapareddy; Rama Acharyya; Rupam Dinda; Purak Das; Remle Celenligil-Cetin; Georgios Floros; Yiannis Sanakis; Amitava Choudhury; Nigam P Rath; Pericles Stavropoulos
Journal:  Inorg Chem       Date:  2010-01-04       Impact factor: 5.165

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.