Literature DB >> 27061734

Condensin-mediated chromosome organization in fission yeast.

Osamu Iwasaki1, Ken-Ichi Noma2.   

Abstract

Genome/chromosome structures are formed by a hierarchy of organizing processes ranging from gene interactions to chromosome territory formation. The SMC complex, cohesin, mediates interactions among enhancers and promoters, thereby regulating transcription. Another SMC complex, condensin, also plays critical roles in genome organization, although the detailed mechanisms remain much less well understood. Here, we discuss our recent findings on how fission yeast condensin mediates interactions among genes and how condensin-dependent interactions play dual roles in the chromosome territory arrangement during interphase and in mitotic chromosome organization, which supports the fidelity of chromosome segregation. Our studies suggest that condensin serves as a functional ligature connecting gene interactions, chromosome territory arrangement, transcriptional regulation, and chromosome segregation.

Entities:  

Keywords:  3D genome organization; Chromosome segregation; Chromosome territory; Condensin; Fission yeast; Mitotic chromosome assembly

Mesh:

Substances:

Year:  2016        PMID: 27061734      PMCID: PMC5184768          DOI: 10.1007/s00294-016-0601-7

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  24 in total

1.  Condensin association with histone H2A shapes mitotic chromosomes.

Authors:  Kenji Tada; Hiroaki Susumu; Takeshi Sakuno; Yoshinori Watanabe
Journal:  Nature       Date:  2011-06-01       Impact factor: 49.962

2.  Structure and stability of cohesin's Smc1-kleisin interaction.

Authors:  Christian H Haering; Doris Schoffnegger; Tatsuya Nishino; Wolfgang Helmhart; Kim Nasmyth; Jan Löwe
Journal:  Mol Cell       Date:  2004-09-24       Impact factor: 17.970

Review 3.  At the heart of the chromosome: SMC proteins in action.

Authors:  Tatsuya Hirano
Journal:  Nat Rev Mol Cell Biol       Date:  2006-05       Impact factor: 94.444

4.  Reconstitution and subunit geometry of human condensin complexes.

Authors:  Itay Onn; Nobuki Aono; Michiko Hirano; Tatsuya Hirano
Journal:  EMBO J       Date:  2007-02-01       Impact factor: 11.598

Review 5.  The 3D Genome as Moderator of Chromosomal Communication.

Authors:  Job Dekker; Leonid Mirny
Journal:  Cell       Date:  2016-03-10       Impact factor: 41.582

6.  Condensin is required for nonhistone protein assembly and structural integrity of vertebrate mitotic chromosomes.

Authors:  Damien F Hudson; Paola Vagnarelli; Reto Gassmann; William C Earnshaw
Journal:  Dev Cell       Date:  2003-08       Impact factor: 12.270

7.  Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation.

Authors:  Wenbo Li; Yiren Hu; Soohwan Oh; Qi Ma; Daria Merkurjev; Xiaoyuan Song; Xiang Zhou; Zhijie Liu; Bogdan Tanasa; Xin He; Aaron Yun Chen; Kenny Ohgi; Jie Zhang; Wen Liu; Michael G Rosenfeld
Journal:  Mol Cell       Date:  2015-07-09       Impact factor: 17.970

8.  Condensin targets and reduces unwound DNA structures associated with transcription in mitotic chromosome condensation.

Authors:  Takashi Sutani; Toyonori Sakata; Ryuichiro Nakato; Koji Masuda; Mai Ishibashi; Daisuke Yamashita; Yutaka Suzuki; Tatsuya Hirano; Masashige Bando; Katsuhiko Shirahige
Journal:  Nat Commun       Date:  2015-07-23       Impact factor: 14.919

9.  Dissection of the essential steps for condensin accumulation at kinetochores and rDNAs during fission yeast mitosis.

Authors:  Norihiko Nakazawa; Takahiro Nakamura; Aya Kokubu; Masahiro Ebe; Koji Nagao; Mitsuhiro Yanagida
Journal:  J Cell Biol       Date:  2008-03-24       Impact factor: 10.539

10.  Involvement of condensin-directed gene associations in the organization and regulation of chromosome territories during the cell cycle.

Authors:  Osamu Iwasaki; Christopher J Corcoran; Ken-Ichi Noma
Journal:  Nucleic Acids Res       Date:  2015-12-23       Impact factor: 16.971

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  13 in total

Review 1.  New insights into cohesin loading.

Authors:  Ireneusz Litwin; Robert Wysocki
Journal:  Curr Genet       Date:  2017-06-19       Impact factor: 3.886

Review 2.  The loading of condensin in the context of chromatin.

Authors:  Xavier Robellet; Vincent Vanoosthuyse; Pascal Bernard
Journal:  Curr Genet       Date:  2016-12-01       Impact factor: 3.886

Review 3.  Critical roles of Shugoshin and histones as tension sensors during mitosis.

Authors:  Christopher J Buehl; Min-Hao Kuo
Journal:  Curr Genet       Date:  2018-05-23       Impact factor: 3.886

Review 4.  A Matter of Scale and Dimensions: Chromatin of Chromosome Landmarks in the Fungi.

Authors:  Allyson A Erlendson; Steven Friedman; Michael Freitag
Journal:  Microbiol Spectr       Date:  2017-07

Review 5.  A new twist in the coil: functions of the coiled-coil domain of structural maintenance of chromosome (SMC) proteins.

Authors:  Avi Matityahu; Itay Onn
Journal:  Curr Genet       Date:  2017-08-23       Impact factor: 3.886

6.  Invisible cities: segregated domains in the yeast genome with distinct structural and functional attributes.

Authors:  Christoforos Nikolaou
Journal:  Curr Genet       Date:  2017-08-05       Impact factor: 3.886

Review 7.  3D clustering of co-regulated genes and its effect on gene expression.

Authors:  Manyu Du; Lu Bai
Journal:  Curr Genet       Date:  2017-05-27       Impact factor: 3.886

8.  DNA Topoisomerase II modulates acetyl-regulation of cohesin-mediated chromosome dynamics.

Authors:  Su-Jiun Lin; Matthew J O'Connell
Journal:  Curr Genet       Date:  2017-04-05       Impact factor: 3.886

9.  Interaction of the Saccharomyces cerevisiae RING-domain protein Nse1 with Nse3 and the Smc5/6 complex is required for chromosome replication and stability.

Authors:  Saima Wani; Neelam Maharshi; Deepash Kothiwal; Lakshmi Mahendrawada; Raju Kalaivani; Shikha Laloraya
Journal:  Curr Genet       Date:  2017-11-08       Impact factor: 3.886

Review 10.  SMC complexes orchestrate the mitotic chromatin interaction landscape.

Authors:  Yasutaka Kakui; Frank Uhlmann
Journal:  Curr Genet       Date:  2017-09-21       Impact factor: 3.886

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