Literature DB >> 26972046

Membrane remodeling and mechanics: Experiments and simulations of α-Synuclein.

Ana West1, Benjamin E Brummel1, Anthony R Braun2, Elizabeth Rhoades3, Jonathan N Sachs4.   

Abstract

We review experimental and simulation approaches that have been used to determine curvature genen class="Species">ration and remodeling of n>n class="Chemical">lipid bilayers by membrane-bending proteins. Particular emphasis is placed on the complementary approaches used to study α-Synuclein (αSyn), a major protein involved in Parkinson's disease (PD). Recent cellular and biophysical experiments have shown that the protein 1) deforms the native structure of mitochondrial and model membranes; and 2) inhibits vesicular fusion. Today's advanced experimental and computational technology has made it possible to quantify these protein-induced changes in membrane shape and material properties. Collectively, experiments, theory and multi-scale simulation techniques have established the key physical determinants of membrane remodeling and rigidity: protein binding energy, protein partition depth, protein density, and membrane tension. Despite the exciting and significant progress made in recent years in these areas, challenges remain in connecting biophysical insights to the cellular processes that lead to disease. This article is part of a Special Issue entitled: Membrane Proteins edited by J.C. Gumbart and Sergei Noskov.
Copyright © 2016. Published by Elsevier B.V.

Entities:  

Keywords:  Bilayer rigidity; Coarse-grained molecular dynamics (CGMD); Membrane curvature; Parkinson's disease; Synaptic vesicles; Tubulation; α-Synuclein

Mesh:

Substances:

Year:  2016        PMID: 26972046      PMCID: PMC5081225          DOI: 10.1016/j.bbamem.2016.03.012

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  175 in total

1.  The amphipathic helix of an enzyme that regulates phosphatidylcholine synthesis remodels membranes into highly curved nanotubules.

Authors:  Svetla G Taneva; Joseph M C Lee; Rosemary B Cornell
Journal:  Biochim Biophys Acta       Date:  2012-01-18

Review 2.  How proteins produce cellular membrane curvature.

Authors:  Joshua Zimmerberg; Michael M Kozlov
Journal:  Nat Rev Mol Cell Biol       Date:  2006-01       Impact factor: 94.444

3.  Bending membranes.

Authors:  Tom Kirchhausen
Journal:  Nat Cell Biol       Date:  2012-09       Impact factor: 28.824

4.  Introductory lecture: basic quantities in model biomembranes.

Authors:  John F Nagle
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

Review 5.  When Physics Takes Over: BAR Proteins and Membrane Curvature.

Authors:  Mijo Simunovic; Gregory A Voth; Andrew Callan-Jones; Patricia Bassereau
Journal:  Trends Cell Biol       Date:  2015-10-28       Impact factor: 20.808

6.  Curvature effect on the structure of phospholipid bilayers.

Authors:  Norbert Kucerka; Jeremy Pencer; Jonathan N Sachs; John F Nagle; John Katsaras
Journal:  Langmuir       Date:  2007-01-30       Impact factor: 3.882

7.  The regulation of synaptic function by alpha-synuclein.

Authors:  Serena Bellani; Vitor L Sousa; Giuseppe Ronzitti; Flavia Valtorta; Jacopo Meldolesi; Evelina Chieregatti
Journal:  Commun Integr Biol       Date:  2010-03

8.  Molecular details of α-synuclein membrane association revealed by neutrons and photons.

Authors:  Zhiping Jiang; Sara K Hess; Frank Heinrich; Jennifer C Lee
Journal:  J Phys Chem B       Date:  2015-04-01       Impact factor: 2.991

9.  α-Synuclein can inhibit SNARE-mediated vesicle fusion through direct interactions with lipid bilayers.

Authors:  David C DeWitt; Elizabeth Rhoades
Journal:  Biochemistry       Date:  2013-03-27       Impact factor: 3.162

10.  Influence of High Pressure on the Bending Rigidity of Model Membranes.

Authors:  Sowmya Purushothaman; Pietro Cicuta; Oscar Ces; Nicholas J Brooks
Journal:  J Phys Chem B       Date:  2015-07-21       Impact factor: 2.991

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  21 in total

Review 1.  Premotor Diagnosis of Parkinson's Disease.

Authors:  Heinz Reichmann
Journal:  Neurosci Bull       Date:  2017-08-03       Impact factor: 5.203

Review 2.  Dynamic behaviors of α-synuclein and tau in the cellular context: New mechanistic insights and therapeutic opportunities in neurodegeneration.

Authors:  Fred Yeboah; Tae-Eun Kim; Anke Bill; Ulf Dettmer
Journal:  Neurobiol Dis       Date:  2019-07-24       Impact factor: 5.996

Review 3.  Parkinson's disease: proteinopathy or lipidopathy?

Authors:  Saranna Fanning; Dennis Selkoe; Ulf Dettmer
Journal:  NPJ Parkinsons Dis       Date:  2020-01-03

Review 4.  Generic nature of the condensed states of proteins.

Authors:  Monika Fuxreiter; Michele Vendruscolo
Journal:  Nat Cell Biol       Date:  2021-06-09       Impact factor: 28.824

5.  How Do Ethanolamine Plasmalogens Contribute to Order and Structure of Neurological Membranes?

Authors:  Ana West; Valeria Zoni; Walter E Teague; Alison N Leonard; Stefano Vanni; Klaus Gawrisch; Stephanie Tristram-Nagle; Jonathan N Sachs; Jeffery B Klauda
Journal:  J Phys Chem B       Date:  2020-01-22       Impact factor: 2.991

6.  Biophysics of membrane curvature remodeling at molecular and mesoscopic lengthscales.

Authors:  N Ramakrishnan; Ryan P Bradley; Richard W Tourdot; Ravi Radhakrishnan
Journal:  J Phys Condens Matter       Date:  2018-05-22       Impact factor: 2.333

7.  α-Synuclein's Uniquely Long Amphipathic Helix Enhances its Membrane Binding and Remodeling Capacity.

Authors:  Anthony R Braun; Michael M Lacy; Vanessa C Ducas; Elizabeth Rhoades; Jonathan N Sachs
Journal:  J Membr Biol       Date:  2017-02-26       Impact factor: 1.843

8.  Lipid Species Dependent Vesicles Clustering Caused by alpha-Synuclein as Revealed by Single-Vesicle Imaging with Total Internal Reflection Fluorescence Microscopy.

Authors:  Chinta Mani Aryal; Owen Tyoe; Jiajie Diao
Journal:  Biophys Rep       Date:  2021-12

Review 9.  Interplay between α-synuclein amyloid formation and membrane structure.

Authors:  Emma I O'Leary; Jennifer C Lee
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2018-10-02       Impact factor: 3.036

10.  Folding and Misfolding of Human Membrane Proteins in Health and Disease: From Single Molecules to Cellular Proteostasis.

Authors:  Justin T Marinko; Hui Huang; Wesley D Penn; John A Capra; Jonathan P Schlebach; Charles R Sanders
Journal:  Chem Rev       Date:  2019-01-04       Impact factor: 60.622

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