Literature DB >> 26925154

Modeling Immune Response to BK Virus Infection and Donor Kidney in Renal Transplant Recipients.

H T Banks1, Shuhua Hu1, Kathryn Link1, Eric S Rosenberg2, Sheila Mitsuma2, Lauren Rosario2.   

Abstract

In this paper we develop and validate with bootstrapping techniques a mechanistic mathematical model of immune response to both BK virus infection and a donor kidney based on known and hypothesized mechanisms in the literature. The model presented does not capture all the details of the immune response but possesses key features that describe a very complex immunological process. We then estimate model parameters using a least squares approach with a typical set of available clinical data. Sensitivity analysis combined with asymptotic theory is used to determine the number of parameters that can be reliably estimated given the limited number of observations.

Entities:  

Keywords:  Renal transplant; human polyomavirus type 1 (BKV); inverse problem; mathematical model; sensitivity analysis

Year:  2015        PMID: 26925154      PMCID: PMC4767521          DOI: 10.1080/17415977.2015.1017484

Source DB:  PubMed          Journal:  Inverse Probl Sci Eng        ISSN: 1741-5977            Impact factor:   1.950


  26 in total

1.  Standard Error Computations for Uncertainty Quantification in Inverse Problems: Asymptotic Theory vs. Bootstrapping.

Authors:  H T Banks; Kathleen Holm; Danielle Robbins
Journal:  Math Comput Model       Date:  2010-11-01

2.  Rapid dynamics of polyomavirus type BK in renal transplant recipients.

Authors:  Georg A Funk; Jurg Steiger; Hans H Hirsch
Journal:  J Infect Dis       Date:  2005-11-30       Impact factor: 5.226

3.  New human papovavirus (B.K.) isolated from urine after renal transplantation.

Authors:  S D Gardner; A M Field; D V Coleman; B Hulme
Journal:  Lancet       Date:  1971-06-19       Impact factor: 79.321

4.  Comparison of Optimal Design Methods in Inverse Problems.

Authors:  H T Banks; Kathleen Holm; Franz Kappel
Journal:  Inverse Probl       Date:  2011-07-01       Impact factor: 2.407

5.  A more accurate method to estimate glomerular filtration rate from serum creatinine: a new prediction equation. Modification of Diet in Renal Disease Study Group.

Authors:  A S Levey; J P Bosch; J B Lewis; T Greene; N Rogers; D Roth
Journal:  Ann Intern Med       Date:  1999-03-16       Impact factor: 25.391

6.  A Model for HCMV Infection in Immunosuppressed Patients.

Authors:  G M Kepler; H T Banks; M Davidian; E S Rosenberg
Journal:  Math Comput Model       Date:  2009-04

7.  Modelling HIV immune response and validation with clinical data.

Authors:  H T Banks; M Davidian; Shuhua Hu; Grace M Kepler; E S Rosenberg
Journal:  J Biol Dyn       Date:  2008-10       Impact factor: 2.179

Review 8.  Cytomegalovirus and polyomavirus BK posttransplant.

Authors:  Adrian Egli; Simone Binggeli; Sohrab Bodaghi; Alexis Dumoulin; Georg A Funk; Nina Khanna; David Leuenberger; Rainer Gosert; Hans H Hirsch
Journal:  Nephrol Dial Transplant       Date:  2007-09       Impact factor: 5.992

9.  Polyomavirus BK replication dynamics in vivo and in silico to predict cytopathology and viral clearance in kidney transplants.

Authors:  G A Funk; R Gosert; P Comoli; F Ginevri; H H Hirsch
Journal:  Am J Transplant       Date:  2008-11       Impact factor: 8.086

10.  The prognostic value of a single hepatitis C virus RNA load measurement taken early after human immunodeficiency virus seroconversion.

Authors:  Esteban Herrero-Martínez; Caroline A Sabin; Jamie G Evans; Anja Griffioen; Christine A Lee; Vincent C Emery
Journal:  J Infect Dis       Date:  2002-07-19       Impact factor: 5.226

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  3 in total

1.  Validated Models of Immune Response to Virus Infection.

Authors:  Amber M Smith
Journal:  Curr Opin Syst Biol       Date:  2018-10-31

2.  Modeling Zika Virus Transmission Dynamics: Parameter Estimates, Disease Characteristics, and Prevention.

Authors:  Munsur Rahman; Kidist Bekele-Maxwell; LeAnna L Cates; H T Banks; Naveen K Vaidya
Journal:  Sci Rep       Date:  2019-07-22       Impact factor: 4.379

Review 3.  BK nephropathy in the native kidneys of patients with organ transplants: Clinical spectrum of BK infection.

Authors:  Darlene Vigil; Nikifor K Konstantinov; Marc Barry; Antonia M Harford; Karen S Servilla; Young Ho Kim; Yijuan Sun; Kavitha Ganta; Antonios H Tzamaloukas
Journal:  World J Transplant       Date:  2016-09-24
  3 in total

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