Literature DB >> 26909005

Multiscale modeling and simulation of brain blood flow.

Paris Perdikaris1, Leopold Grinberg2, George Em Karniadakis3.   

Abstract

The aim of this work is to present an overview of recent advances in multi-scale modeling of brain blood flow. In particular, we present some approaches that enable the in silico study of multi-scale and multi-physics phenomena in the cerebral vasculature. We discuss the formulation of continuum and atomistic modeling approaches, present a consistent framework for their concurrent coupling, and list some of the challenges that one needs to overcome in achieving a seamless and scalable integration of heterogeneous numerical solvers. The effectiveness of the proposed framework is demonstrated in a realistic case involving modeling the thrombus formation process taking place on the wall of a patient-specific cerebral aneurysm. This highlights the ability of multi-scale algorithms to resolve important biophysical processes that span several spatial and temporal scales, potentially yielding new insight into the key aspects of brain blood flow in health and disease. Finally, we discuss open questions in multi-scale modeling and emerging topics of future research.

Entities:  

Year:  2016        PMID: 26909005      PMCID: PMC4752548          DOI: 10.1063/1.4941315

Source DB:  PubMed          Journal:  Phys Fluids (1994)        ISSN: 1070-6631            Impact factor:   3.521


  38 in total

1.  On fractal properties of arterial trees.

Authors:  M Zamir
Journal:  J Theor Biol       Date:  1999-04-21       Impact factor: 2.691

2.  Computational investigation of subject-specific cerebrospinal fluid flow in the third ventricle and aqueduct of Sylvius.

Authors:  Vartan Kurtcuoglu; Michaela Soellinger; Paul Summers; Kevin Boomsma; Dimos Poulikakos; Peter Boesiger; Yiannis Ventikos
Journal:  J Biomech       Date:  2006-08-10       Impact factor: 2.712

Review 3.  The hemo-neural hypothesis: on the role of blood flow in information processing.

Authors:  Christopher I Moore; Rosa Cao
Journal:  J Neurophysiol       Date:  2007-10-03       Impact factor: 2.714

4.  Geometry of the carotid bifurcation predicts its exposure to disturbed flow.

Authors:  Sang-Wook Lee; Luca Antiga; J David Spence; David A Steinman
Journal:  Stroke       Date:  2008-06-12       Impact factor: 7.914

5.  Analyzing transient turbulence in a stenosed carotid artery by proper orthogonal decomposition.

Authors:  Leopold Grinberg; Alexander Yakhot; George Em Karniadakis
Journal:  Ann Biomed Eng       Date:  2009-08-11       Impact factor: 3.934

6.  Flow instability and wall shear stress variation in intracranial aneurysms.

Authors:  H Baek; M V Jayaraman; P D Richardson; G E Karniadakis
Journal:  J R Soc Interface       Date:  2009-12-18       Impact factor: 4.118

7.  Blood flow velocity effects and role of activation delay time on growth and form of platelet thrombi.

Authors:  Igor V Pivkin; Peter D Richardson; George Karniadakis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-03       Impact factor: 11.205

Review 8.  Large-scale simulation of the human arterial tree.

Authors:  L Grinberg; T Anor; J R Madsen; A Yakhot; G E Karniadakis
Journal:  Clin Exp Pharmacol Physiol       Date:  2008-07-29       Impact factor: 2.557

9.  Simulation of the human intracranial arterial tree.

Authors:  Leopold Grinberg; Tomer Anor; Elizabeth Cheever; Joseph R Madsen; George Em Karniadakis
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2009-06-13       Impact factor: 4.226

10.  Coupling poroelasticity and CFD for cerebrospinal fluid hydrodynamics.

Authors:  Brett Tully; Yiannis Ventikos
Journal:  IEEE Trans Biomed Eng       Date:  2009-03-16       Impact factor: 4.538

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  11 in total

Review 1.  Physiome approach for the analysis of vascular flow reserve in the heart and brain.

Authors:  Kyung Eun Lee; Ah-Jin Ryu; Eun-Seok Shin; Eun Bo Shim
Journal:  Pflugers Arch       Date:  2017-03-28       Impact factor: 3.657

2.  Molecular dynamics simulations indicate that deoxyhemoglobin, oxyhemoglobin, carboxyhemoglobin, and glycated hemoglobin under compression and shear exhibit an anisotropic mechanical behavior.

Authors:  Sumith Yesudasan; Xianqiao Wang; Rodney D Averett
Journal:  J Biomol Struct Dyn       Date:  2017-05-22

3.  Quantification of near-wall hemodynamic risk factors in large-scale cerebral arterial trees.

Authors:  Mahsa Ghaffari; Ali Alaraj; Xinjian Du; Xiaohong Joe Zhou; Fady T Charbel; Andreas A Linninger
Journal:  Int J Numer Method Biomed Eng       Date:  2018-05-23       Impact factor: 2.747

4.  4D blood flow model for dose calculation to circulating blood and lymphocytes.

Authors:  Abdelkhalek Hammi; Harald Paganetti; Clemens Grassberger
Journal:  Phys Med Biol       Date:  2020-03-02       Impact factor: 3.609

Review 5.  Methods to measure, model and manipulate fluid flow in brain.

Authors:  Krishnashis Chatterjee; Cora M Carman-Esparza; Jennifer M Munson
Journal:  J Neurosci Methods       Date:  2019-12-12       Impact factor: 2.390

6.  A parallel fluid-solid coupling model using LAMMPS and Palabos based on the immersed boundary method.

Authors:  Jifu Tan; Talid Sinno; Scott L Diamond
Journal:  J Comput Sci       Date:  2018-02-14

7.  A computational study of cancer hyperthermia based on vascular magnetic nanoconstructs.

Authors:  Mahdi Nabil; Paolo Zunino
Journal:  R Soc Open Sci       Date:  2016-09-14       Impact factor: 2.963

8.  Multiscale modelling of blood flow in cerebral microcirculation: Details at capillary scale control accuracy at the level of the cortex.

Authors:  Myriam Peyrounette; Yohan Davit; Michel Quintard; Sylvie Lorthois
Journal:  PLoS One       Date:  2018-01-11       Impact factor: 3.240

9.  A new framework for assessing subject-specific whole brain circulation and perfusion using MRI-based measurements and a multi-scale continuous flow model.

Authors:  Erlend Hodneland; Erik Hanson; Ove Sævareid; Geir Nævdal; Arvid Lundervold; Veronika Šoltészová; Antonella Z Munthe-Kaas; Andreas Deistung; Jürgen R Reichenbach; Jan M Nordbotten
Journal:  PLoS Comput Biol       Date:  2019-06-25       Impact factor: 4.475

10.  Artificial intelligence velocimetry and microaneurysm-on-a-chip for three-dimensional analysis of blood flow in physiology and disease.

Authors:  Shengze Cai; He Li; Fuyin Zheng; Fang Kong; Ming Dao; George Em Karniadakis; Subra Suresh
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-30       Impact factor: 11.205

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