Literature DB >> 18671721

Large-scale simulation of the human arterial tree.

L Grinberg1, T Anor, J R Madsen, A Yakhot, G E Karniadakis.   

Abstract

1. Full-scale simulations of the virtual physiological human (VPH) will require significant advances in modelling, multiscale mathematics, scientific computing and further advances in medical imaging. Herein, we review some of the main issues that need to be resolved in order to make three-dimensional (3D) simulations of blood flow in the human arterial tree feasible in the near future. 2. A straightforward approach is computationally prohibitive even on the emerging petaflop supercomputers, so a three-level hierarchical approach based on vessel size is required, consisting of: (i) a macrovascular network (MaN); (ii) a mesovascular network (MeN); and (iii) a microvascular network (MiN). We present recent simulations of MaN obtained by solving the 3D Navier-Stokes equations on arterial networks with tens of arteries and bifurcations and accounting for the neglected dynamics through proper boundary conditions. 3. A multiscale simulation coupling MaN-MeN-MiN and running on hundreds of thousands of processors on petaflop computers will require no more than a few CPU hours per cardiac cycle within the next 5 years. The rapidly growing capacity of supercomputing centres opens up the possibility of simulation studies of cardiovascular diseases, drug delivery, perfusion in the brain and other pathologies.

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Year:  2008        PMID: 18671721     DOI: 10.1111/j.1440-1681.2008.05010.x

Source DB:  PubMed          Journal:  Clin Exp Pharmacol Physiol        ISSN: 0305-1870            Impact factor:   2.557


  11 in total

1.  Comparison of reduced models for blood flow using Runge-Kutta discontinuous Galerkin methods.

Authors:  Charles Puelz; Sunčica Čanić; Béatrice Rivière; Craig G Rusin
Journal:  Appl Numer Math       Date:  2017-01-11       Impact factor: 2.468

2.  Multiscale modeling and simulation of brain blood flow.

Authors:  Paris Perdikaris; Leopold Grinberg; George Em Karniadakis
Journal:  Phys Fluids (1994)       Date:  2016-02-08       Impact factor: 3.521

3.  Large-scale subject-specific cerebral arterial tree modeling using automated parametric mesh generation for blood flow simulation.

Authors:  Mahsa Ghaffari; Kevin Tangen; Ali Alaraj; Xinjian Du; Fady T Charbel; Andreas A Linninger
Journal:  Comput Biol Med       Date:  2017-10-24       Impact factor: 4.589

4.  Blood flow in the rabbit aortic arch and descending thoracic aorta.

Authors:  P E Vincent; A M Plata; A A E Hunt; P D Weinberg; S J Sherwin
Journal:  J R Soc Interface       Date:  2011-05-18       Impact factor: 4.118

5.  Automatic recognition of subject-specific cerebrovascular trees.

Authors:  Chih-Yang Hsu; Ben Schneller; Ali Alaraj; Michael Flannery; Xiaohong Joe Zhou; Andreas Linninger
Journal:  Magn Reson Med       Date:  2016-01-17       Impact factor: 4.668

6.  Quantification of near-wall hemodynamic risk factors in large-scale cerebral arterial trees.

Authors:  Mahsa Ghaffari; Ali Alaraj; Xinjian Du; Xiaohong Joe Zhou; Fady T Charbel; Andreas A Linninger
Journal:  Int J Numer Method Biomed Eng       Date:  2018-05-23       Impact factor: 2.747

Review 7.  Methods to measure, model and manipulate fluid flow in brain.

Authors:  Krishnashis Chatterjee; Cora M Carman-Esparza; Jennifer M Munson
Journal:  J Neurosci Methods       Date:  2019-12-12       Impact factor: 2.390

8.  Elevated uptake of plasma macromolecules by regions of arterial wall predisposed to plaque instability in a mouse model.

Authors:  Zahra Mohri; Ethan M Rowland; Lindsey A Clarke; Amalia De Luca; Véronique Peiffer; Rob Krams; Spencer J Sherwin; Peter D Weinberg
Journal:  PLoS One       Date:  2014-12-22       Impact factor: 3.240

9.  Assessment of Influences of Stenoses in Right Carotid Artery on Left Carotid Artery Using Wall Stress Marker.

Authors:  Arindam Bit; Dushali Ghagare; Albert A Rizvanov; Himadri Chattopadhyay
Journal:  Biomed Res Int       Date:  2017-01-15       Impact factor: 3.411

10.  The role of biofluid mechanics in the assessment of clinical and pathological observations: sixth International Bio-Fluid Mechanics Symposium and Workshop, March 28-30, 2008 Pasadena, California.

Authors:  Maria Siebes; Yiannis Ventikos
Journal:  Ann Biomed Eng       Date:  2010-01-20       Impact factor: 3.934

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