| Literature DB >> 26900465 |
Yong Wang1, Xiaohong Hui2, Huie Wang2, Tursunjan Kurban2, Chao Hang2, Ying Chen2, Jinming Xing2, Jiufeng Wang3.
Abstract
BACKGROUND: To explore the relationship between the heart-type fatty acid binding protein (H-FABP) gene and intramuscular fat (IMF), a polymorphism of the second exon of the H-FABP gene was investigated in 60 Three-yellow chickens (TYCs) and 60 Hetian-black chickens (HTBCs).Entities:
Keywords: H-FABP; Hetian-black Chicken; Polymorphism; Three-yellow Chicken; mRNA Expression
Year: 2016 PMID: 26900465 PMCID: PMC4759766 DOI: 10.1186/s40104-016-0067-y
Source DB: PubMed Journal: J Anim Sci Biotechnol ISSN: 1674-9782
Fig. 1IMF content in cardiac muscle, chest and leg muscles of TYC and HTBC. Cardiac, chest and leg muscles were collected from TYC at 70 d and HTBC at 120 d. The IMF contents of cardiac (a), chest (b) and leg (c) muscles were measured via the Soxhlet petroleum-ether extraction method according to Chinese National Standards GB/T 5009.6.2004. The data are presented as the mean ± standard error of the mean (SEM) for each tissue (n = 60 per group). * P < 0.05. IMF, intramuscular fat; TYC, Three-yellow chicken; HTBC, Hetian-black chicken
Fig. 2H-FABP genotypes of TYC and HTBC. Blood samples were collected from the wing vein of TYC at 70 d and HTBC at 120 d, anticoagulated via acid citrate dextrose (ACD), and DNA was extracted. Polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) was performed to analyze the polymorphism of the second exon of the H-FABP gene. The bands were named as TT, TC and CC
Genotypic and gene frequency of H-FABP in TYC and HTBC
| Breed | Genotypic Frequency, % | Gene Frequency, % | |||
|---|---|---|---|---|---|
| TT | TC | CC | T | C | |
| TYC | 0.467 (28/60) | 0.400 (24/60) | 0.133 (8/60) | 0.667 (80/120) | 0.333 (40/120) |
| HTBC | 0.417 (25/60) | 0.383 (23/60) | 0.200 (12/60) | 0.608 (73/120) | 0.391 (47/120) |
H-FABP heart-type fatty acid binding protein, TYC Three-yellow chicken, HTBC Hetian-black chicken
TT, TC and CC are genotype frequencies; T and C are alleles. These genotypes were analyzed using the POPGENE software package (v.1.31) in 60 chickens with a 1:1 sex ratio in each group
Hereditary character of H-FABP in TYC and HTBC
| Breed | Ho | He | Ne | PIC | χ2 |
|
|---|---|---|---|---|---|---|
| TYC | 0.400 | 0.448 | 1.800 | 0.346 | 0.708 | 0.40 |
| HTBC | 0.383 | 0.481 | 1.910 | 0.364 | 2.500 | 0.11 |
H-FABP heart-type fatty acid binding protein, TYC Three-yellow chicken, HTBC Hetian-black chicken
Ho observed heterozygosity, He expected heterozygosity, Ne effective number of alleles, PIC polymorphic information content
Ho, He, Ne and χ2 were analyzed using the POPGENE software package (v. 1.31), and the PIC was analyzed using the PowerMaker software package (v. 3.25)
Relationship between H-FABP polymorphism and IMF content in TYC and HTBC
| Tissue | Breed | TT | TC | CC |
|---|---|---|---|---|
| Chest muscle | TYC | 5.029 ± 0.307 | 3.994 ± 0.332 | 4.314 ± 0.575 |
| HTBC | 7.535 ± 0.568a | 5.457 ± 0.581b | 6.133 ± 0.804ab | |
| Leg muscle | TYC | 7.301 ± 0.673 | 5.628 ± 0.727 | 6.506 ± 1.259 |
| HTBC | 10.643 ± 1.031 | 8.742 ± 1.053 | 9.320 ± 1.458 |
H-FABP heart-type fatty acid binding protein, TYC Three-yellow chicken, HTBC Hetian-black chicken
The correlation between H-FABP gene polymorphism and IMF content was performed using the SAS 9.0 software package’s PROC GLM procedures
a,bMeans within a row with no common superscript are different (P < 0.05)
Fig. 3Relative expression of H-FABP mRNA in cardiac, chest and leg muscles of TYC and HTBC. Cardiac, chest and leg muscles were collected from TYC at 70 d and HTBC at 120 d. The relative expression of mRNA for the gene encoding H-FABP in cardiac (a), chest (b) and leg (c) muscles was analyzed using quantitative real-time PCR. The data are presented as the mean ± SEM for each tissue (n = 60 per group). * P < 0.05; *** P < 0.001. TYC, Three-yellow chicken; HTBC, Hetian-black chicken
Correlation between H-FABP mRNA expression and IMF content in TYC and HTBC
| Tissue | TYC | HTBC |
|---|---|---|
| Cardiac muscle | −0.588* | −0.667* |
| Chest muscle | −0.649* | −0.646* |
| Leg muscle | −0.441 | −0.608* |
H-FABP heart-type fatty acid binding protein, TYC Three-yellow chicken, HTBC Hetian-black chicken
The correlation analysis between mRNA expression (2−ΔCt) and IMF content was assessed by Pearson’s correlation coefficient at slaughter time using the SPSS 17.0 software package, * P < 0.05
Fig. 4H-FABP protein expression in cardiac, chest and leg muscle in TYC and HTBC. Cardiac, chest and leg muscles were collected from TYC at 70 d and HTBC at 120 d. H-FABP protein expression in cardiac (a), chest (b) and leg (c) muscles was detected by western blot. Representative panels of H-FABP protein are shown. Expression of β-actin was measured as an internal control. The intensities of H-FABP and β-actin bands were determined using the Quantity One software package. The results are presented as the ratio of the H-FABP band intensity to the β-actin band intensity. The data are presented as the mean ± SEM for each tissue (n = 4 per group). H-FABP, heart-type fatty acid binding protein; TYC, Three-yellow chicken; HTBC, Hetian-black chicken