| Literature DB >> 26889680 |
Despina Chatziharalambous1, Vasiliki Lygirou1, Agnieszka Latosinska1,2, Konstantinos Stravodimos3, Antonia Vlahou1, Vera Jankowski4, Jerome Zoidakis1.
Abstract
ELISA is the main approach for the sensitive quantification of protein biomarkers in body fluids and is currently employed in clinical laboratories for the measurement of clinical markers. As such, it also constitutes the main methodological approach for biomarker validation and further qualification. For the latter, specific assay performance requirements have to be met, as described in respective guidelines of regulatory agencies. Even though many clinical ELISA assays in serum are regularly used, ELISA clinical applications in urine are significantly less. The scope of our study was to evaluate ELISA assay analytical performance in urine for a series of potential biomarkers for bladder cancer, as a first step towards their large scale clinical validation. Seven biomarkers (Secreted protein acidic and rich in cysteine, Survivin, Slit homolog 2 protein, NRC-Interacting Factor 1, Histone 2B, Proteinase-3 and Profilin-1) previously described in the literature as having differential expression in bladder cancer were included in the study. A total of 11 commercially available ELISA tests for these markers were tested by standard curve analysis, assay reproducibility, linearity and spiking experiments. The results show disappointing performance with coefficients of variation>20% for the vast majority of the tests performed. Only 3 assays (for Secreted protein acidic and rich in cysteine, Survivin and Slit homolog 2 protein) passed the accuracy thresholds and were found suitable for further application in marker quantification. These results collectively reflect the difficulties in developing urine-based ELISA assays of sufficient analytical performance for clinical application, presumably attributed to the urine matrix itself and/or presence of markers in various isoforms.Entities:
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Year: 2016 PMID: 26889680 PMCID: PMC4758723 DOI: 10.1371/journal.pone.0149471
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Summary of analytical performance.
| Protein | Company | Catalogue number | Analytical performance |
|---|---|---|---|
| R&D Systems | DSP00 | Successful in all assays | |
| Cloud Clone Corp. | SEA672Hu | Failed in linearity assay | |
| US Biological Life Sciences | 25705 | Failed in recovery and reproducibility assays (linearity not possible) | |
| Cloud Clone Corp. | SEA356Hu | Failed in recovery and reproducibility assays (linearity not possible) | |
| Enzo Life Sciences | ADI-900-111 | Failed in recovery, reproducibility and linearity assays | |
| R&D Systems | DSV00 | Successful in all assays (linearity not possible) | |
| USCN LIFE | E2122h | Failed in recovery, reproducibility and linearity assays | |
| US Biological Life Sciences | 27613 | Failed in recovery, reproducibility and linearity assays | |
| Cloud Clone Corp. | SEC233Hu | Failed in reproducibility and linearity assays | |
| CUSABIO | EL026683HU | Failed in recovery, reproducibility and linearity assays | |
| USCN LIFE | E1019h | Failed in recovery and linearity assays | |
| CUSABIO | E13058h | Failed in recovery, reproducibility and linearity assays |
Fig 1Standard curve validation of A) SPARC (R2 = 0.999) and B) PR3 (R2 = 0.996).
Fig 3Linearity results of A) SPARC and B) PR3.
For each biomarker a high concentration sample was serially diluted and theoretical values were compared to the experimental.
Recovery study results of SPARC. Negative urine samples were spiked with low, medium and high concentration of standard.
| Negative + 3.13 ng/ml SPARC (n = 8) | Mean [SPARC] (ng/ml) | 2.14 |
| Expected [SPARC] (ng/ml) | 1.57 | |
| % Recovery | ||
| Negative + 12.5 ng/ml SPARC (n = 8) | Mean [SPARC] (ng/ml) | 7.4 |
| Expected [SPARC] (ng/ml) | 6.25 | |
| % Recovery | ||
| Negative + 50 ng/ml SPARC (n = 8) | Mean [SPARC] (ng/ml) | 27 |
| Expected [SPARC] (ng/ml) | 25 | |
| % Recovery |
Recovery study results of PR3. Negative urine samples were spiked with low, medium and high concentration of standard.
| Negative + 1.56 ng/ml PR3 (n = 4) | Mean [PR3] (ng/ml) | 2.10 |
| Expected [PR3] (ng/ml) | 0.78 | |
| % Recovery | ||
| Negative + 6.25 ng/ml PR3 (n = 4) | Mean [PR3] (ng/ml) | 4.21 |
| Expected [PR3] (ng/ml) | 3.13 | |
| % Recovery | ||
| Negative + 25 ng/ml PR3 (n = 4) | Mean [PR3] (ng/ml) | 15.74 |
| Expected [PR3] (ng/ml) | 12.50 | |
| % Recovery |
Fig 2Reproducibility study results of A) SPARC and B) PR3.
Three urine samples with low, medium and high concentration were used.