Literature DB >> 26848206

A supervoxel-based segmentation method for prostate MR images.

Zhiqiang Tian1, LiZhi Liu1, Baowei Fei2.   

Abstract

Accurate segmentation of the prostate has many applications in prostate cancer diagnosis and therapy. In this paper, we propose a "Supervoxel" based method for prostate segmentation. The prostate segmentation problem is considered as assigning a label to each supervoxel. An energy function with data and smoothness terms is used to model the labeling process. The data term estimates the likelihood of a supervoxel belongs to the prostate according to a shape feature. The geometric relationship between two neighboring supervoxels is used to construct a smoothness term. A three-dimensional (3D) graph cut method is used to minimize the energy function in order to segment the prostate. A 3D level set is then used to get a smooth surface based on the output of the graph cut. The performance of the proposed segmentation algorithm was evaluated with respect to the manual segmentation ground truth. The experimental results on 12 prostate volumes showed that the proposed algorithm yields a mean Dice similarity coefficient of 86.9%±3.2%. The segmentation method can be used not only for the prostate but also for other organs.

Entities:  

Keywords:  3D graph cut; 3D level set; Magnetic resonance imaging (MRI); prostate cancer; segmentation; supervoxel

Year:  2015        PMID: 26848206      PMCID: PMC4736748          DOI: 10.1117/12.2082255

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  15 in total

1.  Slice-to-volume registration and its potential application to interventional MRI-guided radio-frequency thermal ablation of prostate cancer.

Authors:  Baowei Fei; Jeffrey L Duerk; Daniel T Boll; Jonathan S Lewin; David L Wilson
Journal:  IEEE Trans Med Imaging       Date:  2003-04       Impact factor: 10.048

2.  Prostate segmentation in HIFU therapy.

Authors:  Carole Garnier; Jean-Jacques Bellanger; Ke Wu; Huazhong Shu; Nathalie Costet; Romain Mathieu; Renaud de Crevoisier; Jean-Louis Coatrieux
Journal:  IEEE Trans Med Imaging       Date:  2010-11-29       Impact factor: 10.048

3.  A magnetic resonance spectroscopy driven initialization scheme for active shape model based prostate segmentation.

Authors:  Robert Toth; Pallavi Tiwari; Mark Rosen; Galen Reed; John Kurhanewicz; Arjun Kalyanpur; Sona Pungavkar; Anant Madabhushi
Journal:  Med Image Anal       Date:  2010-10-28       Impact factor: 8.545

4.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

5.  Prostate MRI segmentation using learned semantic knowledge and graph cuts.

Authors:  Dwarikanath Mahapatra; Joachim M Buhmann
Journal:  IEEE Trans Biomed Eng       Date:  2013-11-06       Impact factor: 4.538

6.  Deformable segmentation of 3D MR prostate images via distributed discriminative dictionary and ensemble learning.

Authors:  Yanrong Guo; Yaozong Gao; Yeqin Shao; True Price; Aytekin Oto; Dinggang Shen
Journal:  Med Phys       Date:  2014-07       Impact factor: 4.071

Review 7.  Multiparametric MRI in prostate cancer management.

Authors:  Linda M Johnson; Baris Turkbey; William D Figg; Peter L Choyke
Journal:  Nat Rev Clin Oncol       Date:  2014-05-20       Impact factor: 66.675

8.  Evaluation of prostate segmentation algorithms for MRI: the PROMISE12 challenge.

Authors:  Geert Litjens; Robert Toth; Wendy van de Ven; Caroline Hoeks; Sjoerd Kerkstra; Bram van Ginneken; Graham Vincent; Gwenael Guillard; Neil Birbeck; Jindang Zhang; Robin Strand; Filip Malmberg; Yangming Ou; Christos Davatzikos; Matthias Kirschner; Florian Jung; Jing Yuan; Wu Qiu; Qinquan Gao; Philip Eddie Edwards; Bianca Maan; Ferdinand van der Heijden; Soumya Ghose; Jhimli Mitra; Jason Dowling; Dean Barratt; Henkjan Huisman; Anant Madabhushi
Journal:  Med Image Anal       Date:  2013-12-25       Impact factor: 8.545

9.  Computer-aided detection of prostate cancer in MRI.

Authors:  Geert Litjens; Oscar Debats; Jelle Barentsz; Nico Karssemeijer; Henkjan Huisman
Journal:  IEEE Trans Med Imaging       Date:  2014-05       Impact factor: 10.048

10.  PCG-cut: graph driven segmentation of the prostate central gland.

Authors:  Jan Egger
Journal:  PLoS One       Date:  2013-10-11       Impact factor: 3.240

View more
  1 in total

1.  Computer-aided diagnosis of prostate cancer with MRI.

Authors:  Baowei Fei
Journal:  Curr Opin Biomed Eng       Date:  2017-09
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.