Literature DB >> 26832413

The Histone Variant MacroH2A1.2 Is Necessary for the Activation of Muscle Enhancers and Recruitment of the Transcription Factor Pbx1.

Stefania Dell'Orso1, A Hongjun Wang1, Han-Yu Shih2, Kayoko Saso1, Libera Berghella3, Gustavo Gutierrez-Cruz1, Andreas G Ladurner4, John J O'Shea2, Vittorio Sartorelli5, Hossein Zare1.   

Abstract

Histone variants complement and integrate histone post-translational modifications in regulating transcription. The histone variant macroH2A1 (mH2A1) is almost three times the size of its canonical H2A counterpart, due to the presence of an ∼25 kDa evolutionarily conserved non-histone macro domain. Strikingly, mH2A1 can mediate both gene repression and activation. However, the molecular determinants conferring these alternative functions remain elusive. Here, we report that mH2A1.2 is required for the activation of the myogenic gene regulatory network and muscle cell differentiation. H3K27 acetylation at prospective enhancers is exquisitely sensitive to mH2A1.2, indicating a role of mH2A1.2 in imparting enhancer activation. Both H3K27 acetylation and recruitment of the transcription factor Pbx1 at prospective enhancers are regulated by mH2A1.2. Overall, our findings indicate a role of mH2A1.2 in marking regulatory regions for activation.
Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 26832413      PMCID: PMC4749450          DOI: 10.1016/j.celrep.2015.12.103

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  71 in total

1.  MacroH2A, a core histone containing a large nonhistone region.

Authors:  J R Pehrson; V A Fried
Journal:  Science       Date:  1992-09-04       Impact factor: 47.728

2.  A phosphorylated subpopulation of the histone variant macroH2A1 is excluded from the inactive X chromosome and enriched during mitosis.

Authors:  Emily Bernstein; Tara L Muratore-Schroeder; Robert L Diaz; Jennifer C Chow; Lakshmi N Changolkar; Jeffrey Shabanowitz; Edith Heard; John R Pehrson; Donald F Hunt; C David Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-28       Impact factor: 11.205

3.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

Authors:  Da Wei Huang; Brad T Sherman; Richard A Lempicki
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

4.  Crystal structure of globular domain of histone H5 and its implications for nucleosome binding.

Authors:  V Ramakrishnan; J T Finch; V Graziano; P L Lee; R M Sweet
Journal:  Nature       Date:  1993-03-18       Impact factor: 49.962

5.  Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5.

Authors:  K L Clark; E D Halay; E Lai; S K Burley
Journal:  Nature       Date:  1993-07-29       Impact factor: 49.962

6.  Histone modifications at human enhancers reflect global cell-type-specific gene expression.

Authors:  Nathaniel D Heintzman; Gary C Hon; R David Hawkins; Pouya Kheradpour; Alexander Stark; Lindsey F Harp; Zhen Ye; Leonard K Lee; Rhona K Stuart; Christina W Ching; Keith A Ching; Jessica E Antosiewicz-Bourget; Hui Liu; Xinmin Zhang; Roland D Green; Victor V Lobanenkov; Ron Stewart; James A Thomson; Gregory E Crawford; Manolis Kellis; Bing Ren
Journal:  Nature       Date:  2009-03-18       Impact factor: 49.962

7.  Pbx homeodomain proteins direct Myod activity to promote fast-muscle differentiation.

Authors:  Lisa Maves; Andrew Jan Waskiewicz; Biswajit Paul; Yi Cao; Ashlee Tyler; Cecilia B Moens; Stephen J Tapscott
Journal:  Development       Date:  2007-08-15       Impact factor: 6.868

8.  TopHat: discovering splice junctions with RNA-Seq.

Authors:  Cole Trapnell; Lior Pachter; Steven L Salzberg
Journal:  Bioinformatics       Date:  2009-03-16       Impact factor: 6.937

9.  Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists.

Authors:  Da Wei Huang; Brad T Sherman; Richard A Lempicki
Journal:  Nucleic Acids Res       Date:  2008-11-25       Impact factor: 16.971

10.  Model-based analysis of ChIP-Seq (MACS).

Authors:  Yong Zhang; Tao Liu; Clifford A Meyer; Jérôme Eeckhoute; David S Johnson; Bradley E Bernstein; Chad Nusbaum; Richard M Myers; Myles Brown; Wei Li; X Shirley Liu
Journal:  Genome Biol       Date:  2008-09-17       Impact factor: 13.583

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  24 in total

Review 1.  Shaping Gene Expression by Landscaping Chromatin Architecture: Lessons from a Master.

Authors:  Vittorio Sartorelli; Pier Lorenzo Puri
Journal:  Mol Cell       Date:  2018-06-07       Impact factor: 17.970

2.  The Histone Variant MacroH2A Blocks Cellular Reprogramming by Inhibiting Mesenchymal-to-Epithelial Transition.

Authors:  Maria Pliatska; Maria Kapasa; Antonis Kokkalis; Alexander Polyzos; Dimitris Thanos
Journal:  Mol Cell Biol       Date:  2018-04-30       Impact factor: 4.272

3.  A Muscle-Specific Enhancer RNA Mediates Cohesin Recruitment and Regulates Transcription In trans.

Authors:  Pei-Fang Tsai; Stefania Dell'Orso; Joseph Rodriguez; Karinna O Vivanco; Kyung-Dae Ko; Kan Jiang; Aster H Juan; Aishe A Sarshad; Laura Vian; Michelle Tran; Darawalee Wangsa; A Hongjun Wang; Jelena Perovanovic; Dimitrios Anastasakis; Evelyn Ralston; Thomas Ried; Hong-Wei Sun; Markus Hafner; Daniel R Larson; Vittorio Sartorelli
Journal:  Mol Cell       Date:  2018-07-05       Impact factor: 17.970

4.  Regulation of Breast Cancer-Induced Osteoclastogenesis by MacroH2A1.2 Involving EZH2-Mediated H3K27me3.

Authors:  Jinman Kim; Yonghwan Shin; Sunyoung Lee; Miyeong Kim; Vasu Punj; Jason F Lu; Hongin Shin; Kyunghwan Kim; Tobias S Ulmer; Jungmin Koh; Daewon Jeong; Woojin An
Journal:  Cell Rep       Date:  2018-07-03       Impact factor: 9.423

Review 5.  Temporal regulation of chromatin during myoblast differentiation.

Authors:  Akihito Harada; Yasuyuki Ohkawa; Anthony N Imbalzano
Journal:  Semin Cell Dev Biol       Date:  2017-10-28       Impact factor: 7.727

Review 6.  Histone variants in skeletal myogenesis.

Authors:  Nandini Karthik; Reshma Taneja
Journal:  Epigenetics       Date:  2020-08-02       Impact factor: 4.528

Review 7.  PBX1: a key character of the hallmarks of cancer.

Authors:  Rafaela Nasser Veiga; Jaqueline Carvalho de Oliveira; Daniela Fiori Gradia
Journal:  J Mol Med (Berl)       Date:  2021-09-16       Impact factor: 4.599

Review 8.  Histone variant-specific post-translational modifications.

Authors:  Faith M Joseph; Nicolas L Young
Journal:  Semin Cell Dev Biol       Date:  2022-03-09       Impact factor: 7.499

9.  MacroH2A1.2 deficiency leads to neural stem cell differentiation defects and autism-like behaviors.

Authors:  Hongyan Ma; Libo Su; Wenlong Xia; Wenwen Wang; Guohe Tan; Jianwei Jiao
Journal:  EMBO Rep       Date:  2021-05-27       Impact factor: 9.071

Review 10.  Regulation of Muscle Stem Cell Functions: A Focus on the p38 MAPK Signaling Pathway.

Authors:  Jessica Segalés; Eusebio Perdiguero; Pura Muñoz-Cánoves
Journal:  Front Cell Dev Biol       Date:  2016-08-30
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