Literature DB >> 35277331

Histone variant-specific post-translational modifications.

Faith M Joseph1, Nicolas L Young2.   

Abstract

Post-translational modifications (PTMs) of histones play a key role in DNA-based processes and contribute to cell differentiation and gene function by adding an extra layer of regulation. Variations in histone sequences within each family of histones expands the chromatin repertoire and provide further mechanisms for regulation and signaling. While variants are known to be present in certain genomic loci and carry out important functions, much remains unknown about variant-specific PTMs and their role in regulating chromatin. This ambiguity is in part due to the limited technologies and appropriate reagents to identify and quantitate variant-specific PTMs. Nonetheless, histone variants are an integral portion of the chromatin system and the understanding of their modifications and resolving how PTMs function differently on specific variants is paramount to the advancement of the field. Here we review the current knowledge on post-translational modifications specific to histone variants, with an emphasis on well-characterized PTMs of known function. While not every possible PTM is addressed, we present key variant-specific PTMs and what is known about their function and mechanisms in convenient reference tables.
Copyright © 2022. Published by Elsevier Ltd.

Entities:  

Keywords:  Chromatin; Epigenetics; Histone Variants; Histones; Post-translational modifications; Replication-independent

Year:  2022        PMID: 35277331      PMCID: PMC9458767          DOI: 10.1016/j.semcdb.2022.02.012

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.499


  118 in total

1.  Role of histone H2A ubiquitination in Polycomb silencing.

Authors:  Hengbin Wang; Liangjun Wang; Hediye Erdjument-Bromage; Miguel Vidal; Paul Tempst; Richard S Jones; Yi Zhang
Journal:  Nature       Date:  2004-09-22       Impact factor: 49.962

Review 2.  Multifunctionality of the linker histones: an emerging role for protein-protein interactions.

Authors:  Steven J McBryant; Xu Lu; Jeffrey C Hansen
Journal:  Cell Res       Date:  2010-03-23       Impact factor: 25.617

3.  Serine 31 phosphorylation of histone variant H3.3 is specific to regions bordering centromeres in metaphase chromosomes.

Authors:  Sandra B Hake; Benjamin A Garcia; Monika Kauer; Stephen P Baker; Jeffrey Shabanowitz; Donald F Hunt; C David Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-25       Impact factor: 11.205

4.  Expression patterns and post-translational modifications associated with mammalian histone H3 variants.

Authors:  Sandra B Hake; Benjamin A Garcia; Elizabeth M Duncan; Monika Kauer; Graham Dellaire; Jeffrey Shabanowitz; David P Bazett-Jones; C David Allis; Donald F Hunt
Journal:  J Biol Chem       Date:  2005-11-02       Impact factor: 5.157

Review 5.  Revealing histone variant induced changes via quantitative proteomics.

Authors:  Anna M Arnaudo; Rosalynn C Molden; Benjamin A Garcia
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-08       Impact factor: 8.250

Review 6.  Comprehensive Catalog of Currently Documented Histone Modifications.

Authors:  Yingming Zhao; Benjamin A Garcia
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-09-01       Impact factor: 10.005

7.  Monomethylation of histone H4-lysine 20 is involved in chromosome structure and stability and is essential for mouse development.

Authors:  Hisanobu Oda; Ikuhiro Okamoto; Niall Murphy; Jianhua Chu; Sandy M Price; Michael M Shen; Maria Elena Torres-Padilla; Edith Heard; Danny Reinberg
Journal:  Mol Cell Biol       Date:  2009-02-17       Impact factor: 4.272

8.  Mapping of lysine monomethylation of linker histones in human breast and its cancer.

Authors:  Aiping Lu; Alexandre Zougman; Marek Pudełko; Marek Bebenek; Piotr Ziółkowski; Matthias Mann; Jacek R Wiśniewski
Journal:  J Proteome Res       Date:  2009-09       Impact factor: 4.466

9.  Accumulation of histone variant H3.3 with age is associated with profound changes in the histone methylation landscape.

Authors:  Andrey Tvardovskiy; Veit Schwämmle; Stefan J Kempf; Adelina Rogowska-Wrzesinska; Ole N Jensen
Journal:  Nucleic Acids Res       Date:  2017-09-19       Impact factor: 16.971

Review 10.  Histone H1 Post-Translational Modifications: Update and Future Perspectives.

Authors:  Marta Andrés; Daniel García-Gomis; Inma Ponte; Pedro Suau; Alicia Roque
Journal:  Int J Mol Sci       Date:  2020-08-18       Impact factor: 5.923

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