Literature DB >> 26771107

Cell Penetrant Inhibitors of the KDM4 and KDM5 Families of Histone Lysine Demethylases. 1. 3-Amino-4-pyridine Carboxylate Derivatives.

Susan M Westaway1, Alex G S Preston1, Michael D Barker1, Fiona Brown2, Jack A Brown1, Matthew Campbell1, Chun-Wa Chung2, Hawa Diallo1, Clement Douault1, Gerard Drewes3, Robert Eagle2, Laurie Gordon2, Carl Haslam2, Thomas G Hayhow1, Philip G Humphreys1, Gerard Joberty3, Roy Katso2, Laurens Kruidenier1, Melanie Leveridge2, John Liddle1, Julie Mosley2, Marcel Muelbaier3, Rebecca Randle2, Inma Rioja1, Anne Rueger3, Gail A Seal1, Robert J Sheppard1, Onkar Singh2, Joanna Taylor2, Pamela Thomas2, Douglas Thomson3, David M Wilson1, Kevin Lee1, Rab K Prinjha1.   

Abstract

Optimization of KDM6B (JMJD3) HTS hit 12 led to the identification of 3-((furan-2-ylmethyl)amino)pyridine-4-carboxylic acid 34 and 3-(((3-methylthiophen-2-yl)methyl)amino)pyridine-4-carboxylic acid 39 that are inhibitors of the KDM4 (JMJD2) family of histone lysine demethylases. Compounds 34 and 39 possess activity, IC50 ≤ 100 nM, in KDM4 family biochemical (RFMS) assays with ≥ 50-fold selectivity against KDM6B and activity in a mechanistic KDM4C cell imaging assay (IC50 = 6-8 μM). Compounds 34 and 39 are also potent inhibitors of KDM5C (JARID1C) (RFMS IC50 = 100-125 nM).

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Year:  2016        PMID: 26771107     DOI: 10.1021/acs.jmedchem.5b01537

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  19 in total

1.  Structure-Based Engineering of Irreversible Inhibitors against Histone Lysine Demethylase KDM5A.

Authors:  John R Horton; Clayton B Woodcock; Qin Chen; Xu Liu; Xing Zhang; John Shanks; Ganesha Rai; Bryan T Mott; Daniel J Jansen; Stephen C Kales; Mark J Henderson; Matthew Cyr; Katherine Pohida; Xin Hu; Pranav Shah; Xin Xu; Ajit Jadhav; David J Maloney; Matthew D Hall; Anton Simeonov; Haian Fu; Paula M Vertino; Xiaodong Cheng
Journal:  J Med Chem       Date:  2018-11-15       Impact factor: 7.446

Review 2.  Inhibitors of Protein Methyltransferases and Demethylases.

Authors:  H Ümit Kaniskan; Michael L Martini; Jian Jin
Journal:  Chem Rev       Date:  2017-03-24       Impact factor: 60.622

3.  Insights into the Action of Inhibitor Enantiomers against Histone Lysine Demethylase 5A.

Authors:  John R Horton; Xu Liu; Lizhen Wu; Kai Zhang; John Shanks; Xing Zhang; Ganesha Rai; Bryan T Mott; Daniel J Jansen; Stephen C Kales; Mark J Henderson; Katherine Pohida; Yuhong Fang; Xin Hu; Ajit Jadhav; David J Maloney; Matthew D Hall; Anton Simeonov; Haian Fu; Paula M Vertino; Qin Yan; Xiaodong Cheng
Journal:  J Med Chem       Date:  2018-03-23       Impact factor: 7.446

4.  Design of KDM4 Inhibitors with Antiproliferative Effects in Cancer Models.

Authors:  Young K Chen; Tiziana Bonaldi; Alessandro Cuomo; Joselyn R Del Rosario; David J Hosfield; Toufike Kanouni; Shih-Chu Kao; Chon Lai; Neethan A Lobo; Jennifer Matuszkiewicz; Andrew McGeehan; Shawn M O'Connell; Lihong Shi; Jeffrey A Stafford; Ryan K Stansfield; James M Veal; Michael S Weiss; Natalie Y Yuen; Michael B Wallace
Journal:  ACS Med Chem Lett       Date:  2017-07-27       Impact factor: 4.345

Review 5.  KDM5B is a master regulator of the H3K4-methylome in stem cells, development and cancer.

Authors:  Besa Xhabija; Benjamin L Kidder
Journal:  Semin Cancer Biol       Date:  2018-11-16       Impact factor: 15.707

Review 6.  Recent Advances with KDM4 Inhibitors and Potential Applications.

Authors:  Qiong Wu; Brandon Young; Yan Wang; Andrew M Davidoff; Zoran Rankovic; Jun Yang
Journal:  J Med Chem       Date:  2022-07-15       Impact factor: 8.039

Review 7.  Histone Demethylase JMJD2D: A Novel Player in Colorectal and Hepatocellular Cancers.

Authors:  Qiang Chen; Kesong Peng; Pingli Mo; Chundong Yu
Journal:  Cancers (Basel)       Date:  2022-06-08       Impact factor: 6.575

8.  Structural Basis for KDM5A Histone Lysine Demethylase Inhibition by Diverse Compounds.

Authors:  John R Horton; Xu Liu; Molly Gale; Lizhen Wu; John R Shanks; Xing Zhang; Philip J Webber; Joshua S K Bell; Stephen C Kales; Bryan T Mott; Ganesha Rai; Daniel J Jansen; Mark J Henderson; Daniel J Urban; Matthew D Hall; Anton Simeonov; David J Maloney; Margaret A Johns; Haian Fu; Ajit Jadhav; Paula M Vertino; Qin Yan; Xiaodong Cheng
Journal:  Cell Chem Biol       Date:  2016-07-14       Impact factor: 8.116

9.  Autochthonous tumors driven by Rb1 loss have an ongoing requirement for the RBP2 histone demethylase.

Authors:  Samuel K McBrayer; Benjamin A Olenchock; Gabriel J DiNatale; Diana D Shi; Januka Khanal; Rebecca B Jennings; Jesse S Novak; Matthew G Oser; Alissa K Robbins; Rebecca Modiste; Dennis Bonal; Javid Moslehi; Roderick T Bronson; Donna Neuberg; Quang-De Nguyen; Sabina Signoretti; Julie-Aurore Losman; William G Kaelin
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-02       Impact factor: 11.205

10.  Aspartate/asparagine-β-hydroxylase: a high-throughput mass spectrometric assay for discovery of small molecule inhibitors.

Authors:  Lennart Brewitz; Anthony Tumber; Inga Pfeffer; Michael A McDonough; Christopher J Schofield
Journal:  Sci Rep       Date:  2020-05-26       Impact factor: 4.379

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