Literature DB >> 26755887

Nuclear magnetic resonance based metabolomics and liver diseases: Recent advances and future clinical applications.

Roland Amathieu1, Mohamed Nawfal Triba1, Corentine Goossens1, Nadia Bouchemal1, Pierre Nahon1, Philippe Savarin1, Laurence Le Moyec1.   

Abstract

Metabolomics is defined as the quantitative measurement of the dynamic multiparametric metabolic response of living systems to pathophysiological stimuli or genetic modification. It is an "omics" technique that is situated downstream of genomics, transcriptomics and proteomics. Metabolomics is recognized as a promising technique in the field of systems biology for the evaluation of global metabolic changes. During the last decade, metabolomics approaches have become widely used in the study of liver diseases for the detection of early biomarkers and altered metabolic pathways. It is a powerful technique to improve our pathophysiological knowledge of various liver diseases. It can be a useful tool to help clinicians in the diagnostic process especially to distinguish malignant and non-malignant liver disease as well as to determine the etiology or severity of the liver disease. It can also assess therapeutic response or predict drug induced liver injury. Nevertheless, the usefulness of metabolomics is often not understood by clinicians, especially the concept of metabolomics profiling or fingerprinting. In the present work, after a concise description of the different techniques and processes used in metabolomics, we will review the main research on this subject by focusing specifically on in vitro proton nuclear magnetic resonance spectroscopy based metabolomics approaches in human studies. We will first consider the clinical point of view enlighten physicians on this new approach and emphasis its future use in clinical "routine".

Entities:  

Keywords:  Cirrhosis; In vitro nuclear magnetic resonance spectroscopy; Liver diseases; Metabolomics

Mesh:

Year:  2016        PMID: 26755887      PMCID: PMC4698504          DOI: 10.3748/wjg.v22.i1.417

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  38 in total

1.  Urinary metabolic biomarkers of hepatocellular carcinoma in an Egyptian population: a validation study.

Authors:  Mohamed I F Shariff; Asmaa I Gomaa; I Jane Cox; Madhvi Patel; Horace R T Williams; Mary M E Crossey; Andrew V Thillainayagam; Howard C Thomas; Imam Waked; Shahid A Khan; Simon D Taylor-Robinson
Journal:  J Proteome Res       Date:  2011-03-09       Impact factor: 4.466

Review 2.  Systems level studies of mammalian metabolomes: the roles of mass spectrometry and nuclear magnetic resonance spectroscopy.

Authors:  Warwick B Dunn; David I Broadhurst; Helen J Atherton; Royston Goodacre; Julian L Griffin
Journal:  Chem Soc Rev       Date:  2010-08-17       Impact factor: 54.564

3.  Metabolic phenotyping in health and disease.

Authors:  Elaine Holmes; Ian D Wilson; Jeremy K Nicholson
Journal:  Cell       Date:  2008-09-05       Impact factor: 41.582

4.  Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism.

Authors:  T Andrew Clayton; David Baker; John C Lindon; Jeremy R Everett; Jeremy K Nicholson
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-10       Impact factor: 11.205

5.  A systems biology approach to understanding elevated serum alanine transaminase levels in a clinical trial with ximelagatran.

Authors:  Ulf Andersson; Johan Lindberg; Shunghuang Wang; Raji Balasubramanian; Maritha Marcusson-Ståhl; Mira Hannula; Chenhui Zeng; Peter J Juhasz; Johan Kolmert; Jonas Bäckström; Lars Nord; Kerstin Nilsson; Steve Martin; Björn Glinghammar; Karin Cederbrant; Ina Schuppe-Koistinen
Journal:  Biomarkers       Date:  2009-12       Impact factor: 2.658

6.  Application of 1H NMR-based metabonomics in the study of metabolic profiling of human hepatocellular carcinoma and liver cirrhosis.

Authors:  Hongchang Gao; Qiang Lu; Xia Liu; Hui Cong; Liangcai Zhao; Huimin Wang; Donghai Lin
Journal:  Cancer Sci       Date:  2009-04       Impact factor: 6.716

7.  The human serum metabolome.

Authors:  Nikolaos Psychogios; David D Hau; Jun Peng; An Chi Guo; Rupasri Mandal; Souhaila Bouatra; Igor Sinelnikov; Ramanarayan Krishnamurthy; Roman Eisner; Bijaya Gautam; Nelson Young; Jianguo Xia; Craig Knox; Edison Dong; Paul Huang; Zsuzsanna Hollander; Theresa L Pedersen; Steven R Smith; Fiona Bamforth; Russ Greiner; Bruce McManus; John W Newman; Theodore Goodfriend; David S Wishart
Journal:  PLoS One       Date:  2011-02-16       Impact factor: 3.240

8.  HMDB: the Human Metabolome Database.

Authors:  David S Wishart; Dan Tzur; Craig Knox; Roman Eisner; An Chi Guo; Nelson Young; Dean Cheng; Kevin Jewell; David Arndt; Summit Sawhney; Chris Fung; Lisa Nikolai; Mike Lewis; Marie-Aude Coutouly; Ian Forsythe; Peter Tang; Savita Shrivastava; Kevin Jeroncic; Paul Stothard; Godwin Amegbey; David Block; David D Hau; James Wagner; Jessica Miniaci; Melisa Clements; Mulu Gebremedhin; Natalie Guo; Ying Zhang; Gavin E Duggan; Glen D Macinnis; Alim M Weljie; Reza Dowlatabadi; Fiona Bamforth; Derrick Clive; Russ Greiner; Liang Li; Tom Marrie; Brian D Sykes; Hans J Vogel; Lori Querengesser
Journal:  Nucleic Acids Res       Date:  2007-01       Impact factor: 16.971

Review 9.  Measuring the metabolome: current analytical technologies.

Authors:  Warwick B Dunn; Nigel J C Bailey; Helen E Johnson
Journal:  Analyst       Date:  2005-03-04       Impact factor: 4.616

10.  Serum 1H-NMR metabolomic fingerprints of acute-on-chronic liver failure in intensive care unit patients with alcoholic cirrhosis.

Authors:  Roland Amathieu; Mohamed N Triba; Pierre Nahon; Nadia Bouchemal; Walid Kamoun; Hakim Haouache; Jean-Claude Trinchet; Philippe Savarin; Laurence Le Moyec; Gilles Dhonneur
Journal:  PLoS One       Date:  2014-02-19       Impact factor: 3.240

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  17 in total

1.  Nuclear magnetic resonance metabolomics and human liver diseases: The principles and evidence associated with protein and carbohydrate metabolism.

Authors:  Laurence Le Moyec; Mohamed N Triba; Pierre Nahon; Nadia Bouchemal; Edith Hantz; Corentine Goossens; Roland Amathieu; Philippe Savarin
Journal:  Biomed Rep       Date:  2017-03-03

2.  Short-chain fatty acid and fecal microbiota profiles are linked to fibrosis in primary biliary cholangitis.

Authors:  Craig Lammert; Andrea S Shin; Huiping Xu; Christopher Hemmerich; Thomas M O'Connell; Naga Chalasani
Journal:  FEMS Microbiol Lett       Date:  2021-04-22       Impact factor: 2.742

3.  Metabolic Characterization of Advanced Liver Fibrosis in HCV Patients as Studied by Serum 1H-NMR Spectroscopy.

Authors:  Nieves Embade; Zoe Mariño; Tammo Diercks; Ainara Cano; Sabela Lens; Diana Cabrera; Miquel Navasa; Juan M Falcón-Pérez; Joan Caballería; Azucena Castro; Jaume Bosch; José M Mato; Oscar Millet
Journal:  PLoS One       Date:  2016-05-09       Impact factor: 3.240

4.  Identification of a discriminative metabolomic fingerprint of potential clinical relevance in saliva of patients with periodontitis using 1H nuclear magnetic resonance (NMR) spectroscopy.

Authors:  Matthias Rzeznik; Mohamed Nawfal Triba; Pierre Levy; Sébastien Jungo; Eliot Botosoa; Boris Duchemann; Laurence Le Moyec; Jean-François Bernaudin; Philippe Savarin; Dominique Guez
Journal:  PLoS One       Date:  2017-08-24       Impact factor: 3.240

5.  Serum Metabolomics Analysis Reveals a Distinct Metabolic Profile of Patients with Primary Biliary Cholangitis.

Authors:  Juan Hao; Tao Yang; Yang Zhou; Guo-Yuan Gao; Feng Xing; Yuan Peng; Yan-Yan Tao; Cheng-Hai Liu
Journal:  Sci Rep       Date:  2017-04-11       Impact factor: 4.379

Review 6.  Biomarkers for primary biliary cholangitis: current perspectives.

Authors:  Elias Kouroumalis; Demetrius Samonakis; Argyro Voumvouraki
Journal:  Hepat Med       Date:  2018-06-18

7.  Metabolic profiling of liver and faeces in mice infected with echinococcosis.

Authors:  Mingxing Zhu; Xiancai Du; Hongxia Xu; Songhao Yang; Chan Wang; Yazhou Zhu; Tingrui Zhang; Wei Zhao
Journal:  Parasit Vectors       Date:  2021-06-14       Impact factor: 3.876

8.  Proton nuclear magnetic resonance-based metabonomic models for non-invasive diagnosis of liver fibrosis in chronic hepatitis C: Optimizing the classification of intermediate fibrosis.

Authors:  Andrea Dória Batista; Carlos Jonnatan Pimentel Barros; Tássia Brena Barroso Carneiro Costa; Michele Maria Gonçalves de Godoy; Ronaldo Dionísio Silva; Joelma Carvalho Santos; Mariana Montenegro de Melo Lira; Norma Thomé Jucá; Edmundo Pessoa de Almeida Lopes; Ricardo Oliveira Silva
Journal:  World J Hepatol       Date:  2018-01-27

9.  Identification of key metabolic changes during liver fibrosis progression in rats using a urine and serum metabolomics approach.

Authors:  Hong Chang; Hong-Yu Meng; Shu-Min Liu; Yu Wang; Xiao-Xu Yang; Fang Lu; Hong-Yu Wang
Journal:  Sci Rep       Date:  2017-09-12       Impact factor: 4.379

10.  Metabolomics and eicosanoid analysis identified serum biomarkers for distinguishing hepatocellular carcinoma from hepatitis B virus-related cirrhosis.

Authors:  Zhi-Gang Gong; Weijie Zhao; Jianbing Zhang; Xi Wu; Jing Hu; Guo-Chang Yin; Yong-Jiang Xu
Journal:  Oncotarget       Date:  2017-07-10
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