Literature DB >> 26729715

Ancient Evolution and Recent Evolution Converge for the Biodegradation of Cyanuric Acid and Related Triazines.

Jennifer L Seffernick1,2,3, Lawrence P Wackett4,2,3.   

Abstract

Cyanuric acid was likely present on prebiotic Earth, may have been a component of early genetic materials, and is synthesized industrially today on a scale of more than one hundred million pounds per year in the United States. In light of this, it is not surprising that some bacteria and fungi have a metabolic pathway that sequentially hydrolyzes cyanuric acid and its metabolites to release the nitrogen atoms as ammonia to support growth. The initial reaction that opens the s-triazine ring is catalyzed by the unusual enzyme cyanuric acid hydrolase. This enzyme is in a rare protein family that consists of only cyanuric acid hydrolase (CAH) and barbiturase, with barbiturase participating in pyrimidine catabolism by some actinobacterial species. The X-ray structures of two cyanuric acid hydrolase proteins show that this family has a unique protein fold. Phylogenetic, bioinformatic, enzymological, and genetic studies are consistent with the idea that CAH has an ancient protein fold that was rare in microbial populations but is currently becoming more widespread in microbial populations in the wake of anthropogenic synthesis of cyanuric acid and other s-triazine compounds that are metabolized via a cyanuric acid intermediate. The need for the removal of cyanuric acid from swimming pools and spas, where it is used as a disinfectant stabilizer, can potentially be met using an enzyme filtration system. A stable thermophilic cyanuric acid hydrolase from Moorella thermoacetica is being tested for this purpose.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 26729715      PMCID: PMC4784045          DOI: 10.1128/AEM.03594-15

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  67 in total

1.  Novel amidohydrolytic reactions in oxidative pyrimidine metabolism: analysis of the barbiturase reaction and discovery of a novel enzyme, ureidomalonase.

Authors:  C L Soong; J Ogawa; S Shimizu
Journal:  Biochem Biophys Res Commun       Date:  2001-08-10       Impact factor: 3.575

Review 2.  Rapid evolution of bacterial catabolic enzymes: a case study with atrazine chlorohydrolase.

Authors:  J L Seffernick; L P Wackett
Journal:  Biochemistry       Date:  2001-10-30       Impact factor: 3.162

3.  Enhanced degradation of atrazine under field conditions correlates with a loss of weed control in the glasshouse.

Authors:  L Jason Krutz; Robert M Zablotowicz; Krishna N Reddy; Clifford H Koger; Mark A Weaver
Journal:  Pest Manag Sci       Date:  2007-01       Impact factor: 4.845

Review 4.  Expanding the enzyme universe: accessing non-natural reactions by mechanism-guided directed evolution.

Authors:  Hans Renata; Z Jane Wang; Frances H Arnold
Journal:  Angew Chem Int Ed Engl       Date:  2015-02-03       Impact factor: 15.336

5.  Efficient self-assembly in water of long noncovalent polymers by nucleobase analogues.

Authors:  Brian J Cafferty; Isaac Gállego; Michael C Chen; Katherine I Farley; Ramon Eritja; Nicholas V Hud
Journal:  J Am Chem Soc       Date:  2013-02-08       Impact factor: 15.419

6.  Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family.

Authors:  Jennifer L Seffernick; Jasmine S Erickson; Stephan M Cameron; Seunghee Cho; Anthony G Dodge; Jack E Richman; Michael J Sadowsky; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2012-06-22       Impact factor: 3.490

7.  The monofunctional chorismate mutase from Bacillus subtilis. Structure determination of chorismate mutase and its complexes with a transition state analog and prephenate, and implications for the mechanism of the enzymatic reaction.

Authors:  Y M Chook; J V Gray; H Ke; W N Lipscomb
Journal:  J Mol Biol       Date:  1994-07-29       Impact factor: 5.469

8.  Gene sequence and properties of an s-triazine ring-cleavage enzyme from Pseudomonas sp. strain NRRLB-12227.

Authors:  J S Karns
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

Review 9.  Biodegradation of atrazine and related s-triazine compounds: from enzymes to field studies.

Authors:  L P Wackett; M J Sadowsky; B Martinez; N Shapir
Journal:  Appl Microbiol Biotechnol       Date:  2002-01       Impact factor: 4.813

Review 10.  The genome of Rhizobium leguminosarum has recognizable core and accessory components.

Authors:  J Peter W Young; Lisa C Crossman; Andrew W B Johnston; Nicholas R Thomson; Zara F Ghazoui; Katherine H Hull; Margaret Wexler; Andrew R J Curson; Jonathan D Todd; Philip S Poole; Tim H Mauchline; Alison K East; Michael A Quail; Carol Churcher; Claire Arrowsmith; Inna Cherevach; Tracey Chillingworth; Kay Clarke; Ann Cronin; Paul Davis; Audrey Fraser; Zahra Hance; Heidi Hauser; Kay Jagels; Sharon Moule; Karen Mungall; Halina Norbertczak; Ester Rabbinowitsch; Mandy Sanders; Mark Simmonds; Sally Whitehead; Julian Parkhill
Journal:  Genome Biol       Date:  2006-04-26       Impact factor: 13.583

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  6 in total

1.  Triazine Probes Target Ascorbate Peroxidases in Plants.

Authors:  Kyoko Morimoto; Kyle S Cole; Jiorgos Kourelis; Collin H Witt; Daniel Brown; Daniel Krahn; Monika Stegmann; Farnusch Kaschani; Markus Kaiser; Jonathan Burton; Shabaz Mohammed; Kazuko Yamaguchi-Shinozaki; Eranthie Weerapana; Renier A L van der Hoorn
Journal:  Plant Physiol       Date:  2019-05-28       Impact factor: 8.340

2.  Cyanuric Acid Biodegradation via Biuret: Physiology, Taxonomy, and Geospatial Distribution.

Authors:  Kelly G Aukema; Lambros J Tassoulas; Serina L Robinson; Jessica F Konopatski; Madison D Bygd; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2020-01-07       Impact factor: 4.792

3.  Structure of the Cyanuric Acid Hydrolase TrzD Reveals Product Exit Channel.

Authors:  Asim K Bera; Kelly G Aukema; Mikael Elias; Lawrence P Wackett
Journal:  Sci Rep       Date:  2017-03-27       Impact factor: 4.379

4.  The Metabolic Redox Regime of Pseudomonas putida Tunes Its Evolvability toward Novel Xenobiotic Substrates.

Authors:  Özlem Akkaya; Danilo R Pérez-Pantoja; Belén Calles; Pablo I Nikel; Víctor de Lorenzo
Journal:  MBio       Date:  2018-08-28       Impact factor: 7.867

5.  Crystal structures of Moorella thermoacetica cyanuric acid hydrolase reveal conformational flexibility and asymmetry important for catalysis.

Authors:  Ke Shi; Seunghee Cho; Kelly G Aukema; Thomas Lee; Asim K Bera; Jennifer L Seffernick; Lawrence P Wackett; Hideki Aihara
Journal:  PLoS One       Date:  2019-06-10       Impact factor: 3.240

6.  Robustness of anaerobes exposed to cyanuric acid contaminated wastewater and achieving efficient removal via optimized co-digestion scheme.

Authors:  Kabir Abdullahi; Ahmed Elreedy; Manabu Fujii; Mona G Ibrahim; Ahmed Tawfik
Journal:  J Adv Res       Date:  2020-02-17       Impact factor: 10.479

  6 in total

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