Literature DB >> 10427042

Gene sequence and properties of an s-triazine ring-cleavage enzyme from Pseudomonas sp. strain NRRLB-12227.

J S Karns1.   

Abstract

Pesticides based on the s-triazine ring structure are widely used in cultivation of food crops. Cleavage of the s-triazine ring is an important step in the mineralization of s-triazine compounds and hence in their complete removal from the environment. Cyanuric acid amidohydrolase cleaves cyanuric acid (2,4,6-trihydroxy-s-triazine), which yields carbon dioxide and biuret; the biuret is subject to further metabolism, which yields CO(2) and ammonia. The trzD gene encoding cyanuric acid amidohydrolase was cloned into pMMB277 from Pseudomonas sp. strain NRRLB-12227, a strain that is capable of utilizing s-triazines as nitrogen sources. Hydrolysis of cyanuric acid was detected in crude extracts of Escherichia coli containing the cloned gene by monitoring the disappearance of cyanuric acid and the appearance of biuret by high-performance liquid chromatography (HPLC). DEAE and hydrophobic interaction HPLC were used to purify cyanuric acid amidohydrolase to homogeneity, and a spectrophotometric assay for the purified enzyme was developed. The purified enzyme had an apparent K(m) of 0.05 mM for cyanuric acid at pH 8.0. The enzyme did not cleave any other s-triazine or hydroxypyrimidine compound, although barbituric acid (2,4, 6-trihydroxypyrimidine) was found to be a strong competitive inhibitor. Neither the nucleotide sequence of trzD nor the amino acid sequence of the gene product exhibited a significant level of similarity to any known gene or protein.

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Year:  1999        PMID: 10427042      PMCID: PMC91527     

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  19 in total

1.  Cloning and comparison of the DNA encoding ammelide aminohydrolase and cyanuric acid amidohydrolase from three s-triazine-degrading bacterial strains.

Authors:  R W Eaton; J S Karns
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

2.  Cyanuric acid as nitrogen source for micro-organisms.

Authors:  H L Jensen; A S Abdel-Ghaffar
Journal:  Arch Mikrobiol       Date:  1969

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  A rapid boiling method for the preparation of bacterial plasmids.

Authors:  D S Holmes; M Quigley
Journal:  Anal Biochem       Date:  1981-06       Impact factor: 3.365

5.  The atzB gene of Pseudomonas sp. strain ADP encodes the second enzyme of a novel atrazine degradation pathway.

Authors:  K L Boundy-Mills; M L de Souza; R T Mandelbaum; L P Wackett; M J Sadowsky
Journal:  Appl Environ Microbiol       Date:  1997-03       Impact factor: 4.792

6.  Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification, and protein characterization.

Authors:  M L de Souza; M J Sadowsky; L P Wackett
Journal:  J Bacteriol       Date:  1996-08       Impact factor: 3.490

7.  AtzC is a new member of the amidohydrolase protein superfamily and is homologous to other atrazine-metabolizing enzymes.

Authors:  M J Sadowsky; Z Tong; M de Souza; L P Wackett
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

8.  Isolation and Characterization of a Pseudomonas sp. That Mineralizes the s-Triazine Herbicide Atrazine.

Authors:  R T Mandelbaum; D L Allan; L P Wackett
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

9.  Ring cleavage and degradative pathway of cyanuric acid in bacteria.

Authors:  A M Cook; P Beilstein; H Grossenbacher; R Hütter
Journal:  Biochem J       Date:  1985-10-01       Impact factor: 3.857

10.  Degradation and mineralization of atrazine by a soil bacterial isolate.

Authors:  M Radosevich; S J Traina; Y L Hao; O H Tuovinen
Journal:  Appl Environ Microbiol       Date:  1995-01       Impact factor: 4.792

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  26 in total

1.  Allophanate hydrolase, not urease, functions in bacterial cyanuric acid metabolism.

Authors:  Gang Cheng; Nir Shapir; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

Review 2.  Evolution of catabolic pathways: Genomic insights into microbial s-triazine metabolism.

Authors:  N Shapir; E F Mongodin; M J Sadowsky; S C Daugherty; K E Nelson; L P Wackett
Journal:  J Bacteriol       Date:  2006-11-17       Impact factor: 3.490

Review 3.  Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

Authors:  Manuel Carmona; María Teresa Zamarro; Blas Blázquez; Gonzalo Durante-Rodríguez; Javier F Juárez; J Andrés Valderrama; María J L Barragán; José Luis García; Eduardo Díaz
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

4.  Expanding the cyanuric acid hydrolase protein family to the fungal kingdom.

Authors:  Anthony G Dodge; Chelsea S Preiner; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2013-09-13       Impact factor: 3.490

5.  Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family.

Authors:  Jennifer L Seffernick; Jasmine S Erickson; Stephan M Cameron; Seunghee Cho; Anthony G Dodge; Jack E Richman; Michael J Sadowsky; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2012-06-22       Impact factor: 3.490

6.  Isolation and characterization of a Pseudomonas aeruginosa from a virgin Brazilian Amazon region with potential to degrade atrazine.

Authors:  Ana Flavia Tonelli Fernandes; Michelle Barbosa Partata da Silva; Vinicius Vicente Martins; Carlos Eduardo Saraiva Miranda; Eliana Guedes Stehling
Journal:  Environ Sci Pollut Res Int       Date:  2014-07-18       Impact factor: 4.223

7.  Investigation of some disinfection chemicals and water quality parameters in swimming pools in the city center and districts of Canakkale, Turkey.

Authors:  Tolga Uysal; Selehattin Yilmaz; Muhammet Turkoglu; Murat Sadikoglu
Journal:  Environ Monit Assess       Date:  2017-06-16       Impact factor: 2.513

8.  Enzymatic degradation of chlorodiamino-s-triazine.

Authors:  Jennifer L Seffernick; Nir Shapir; Michael Schoeb; Gilbert Johnson; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2002-09       Impact factor: 4.792

9.  Thermostable cyanuric acid hydrolase from Moorella thermoacetica ATCC 39073.

Authors:  Qingyan Li; Jennifer L Seffernick; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2009-09-18       Impact factor: 4.792

10.  On the origins of cyanuric acid hydrolase: purification, substrates, and prevalence of AtzD from Pseudomonas sp. strain ADP.

Authors:  Isaac Fruchey; Nir Shapir; Michael J Sadowsky; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

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