Literature DB >> 26725010

KAP1 Recruitment of the 7SK snRNP Complex to Promoters Enables Transcription Elongation by RNA Polymerase II.

Ryan P McNamara1, Jonathan E Reeder2, Elizabeth A McMillan3, Curtis W Bacon1, Jennifer L McCann1, Iván D'Orso4.   

Abstract

The transition from transcription initiation to elongation at promoters of primary response genes (PRGs) in metazoan cells is controlled by inducible transcription factors, which utilize P-TEFb to phosphorylate RNA polymerase II (Pol II) in response to stimuli. Prior to stimulation, a fraction of P-TEFb is recruited to promoter-proximal regions in a catalytically inactive state bound to the 7SK small nuclear ribonucleoprotein (snRNP) complex. However, it remains unclear how and why the 7SK snRNP is assembled at these sites. Here we report that the transcriptional regulator KAP1 continuously tethers the 7SK snRNP to PRG promoters to facilitate P-TEFb recruitment and productive elongation in response to stimulation. Remarkably, besides PRGs, genome-wide studies revealed that KAP1 and 7SK snRNP co-occupy most promoter-proximal regions containing paused Pol II. Collectively, we provide evidence of an unprecedented mechanism controlling 7SK snRNP delivery to promoter-proximal regions to facilitate "on-site" P-TEFb activation and Pol II elongation.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26725010      PMCID: PMC4714561          DOI: 10.1016/j.molcel.2015.11.004

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  41 in total

1.  c-Myc regulates transcriptional pause release.

Authors:  Peter B Rahl; Charles Y Lin; Amy C Seila; Ryan A Flynn; Scott McCuine; Christopher B Burge; Phillip A Sharp; Richard A Young
Journal:  Cell       Date:  2010-04-30       Impact factor: 41.582

Review 2.  Selective transcription in response to an inflammatory stimulus.

Authors:  Stephen T Smale
Journal:  Cell       Date:  2010-03-19       Impact factor: 41.582

3.  A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling.

Authors:  Vladimir R Ramirez-Carrozzi; Daniel Braas; Dev M Bhatt; Christine S Cheng; Christine Hong; Kevin R Doty; Joshua C Black; Alexander Hoffmann; Michael Carey; Stephen T Smale
Journal:  Cell       Date:  2009-07-10       Impact factor: 41.582

4.  Control of inducible gene expression by signal-dependent transcriptional elongation.

Authors:  Diana C Hargreaves; Tiffany Horng; Ruslan Medzhitov
Journal:  Cell       Date:  2009-07-10       Impact factor: 41.582

5.  RNA polymerase is poised for activation across the genome.

Authors:  Ginger W Muse; Daniel A Gilchrist; Sergei Nechaev; Ruchir Shah; Joel S Parker; Sherry F Grissom; Julia Zeitlinger; Karen Adelman
Journal:  Nat Genet       Date:  2007-11-11       Impact factor: 38.330

6.  Epigenetic silencing of human immunodeficiency virus (HIV) transcription by formation of restrictive chromatin structures at the viral long terminal repeat drives the progressive entry of HIV into latency.

Authors:  Richard Pearson; Young Kyeung Kim; Joseph Hokello; Kara Lassen; Julia Friedman; Mudit Tyagi; Jonathan Karn
Journal:  J Virol       Date:  2008-10-01       Impact factor: 5.103

7.  KAP1 controls endogenous retroviruses in embryonic stem cells.

Authors:  Helen M Rowe; Johan Jakobsson; Daniel Mesnard; Jacques Rougemont; Séverine Reynard; Tugce Aktas; Pierre V Maillard; Hillary Layard-Liesching; Sonia Verp; Julien Marquis; François Spitz; Daniel B Constam; Didier Trono
Journal:  Nature       Date:  2010-01-14       Impact factor: 49.962

8.  A La-related protein modulates 7SK snRNP integrity to suppress P-TEFb-dependent transcriptional elongation and tumorigenesis.

Authors:  Nanhai He; Nadine S Jahchan; Eunmee Hong; Qiang Li; Mark A Bayfield; Richard J Maraia; Kunxin Luo; Qiang Zhou
Journal:  Mol Cell       Date:  2008-01-31       Impact factor: 17.970

9.  A genome-wide RNAi screen identifies a new transcriptional module required for self-renewal.

Authors:  Guang Hu; Jonghwan Kim; Qikai Xu; Yumei Leng; Stuart H Orkin; Stephen J Elledge
Journal:  Genes Dev       Date:  2009-04-01       Impact factor: 11.361

10.  LARP7 is a stable component of the 7SK snRNP while P-TEFb, HEXIM1 and hnRNP A1 are reversibly associated.

Authors:  Brian J Krueger; Célia Jeronimo; Bibhuti Bhusan Roy; Annie Bouchard; Charlotte Barrandon; Sarah A Byers; Courtney E Searcey; Jeffrey J Cooper; Olivier Bensaude; Eric A Cohen; Benoit Coulombe; David H Price
Journal:  Nucleic Acids Res       Date:  2008-02-16       Impact factor: 16.971

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  55 in total

1.  RNA polymerase II promoter-proximal pausing in mammalian long non-coding genes.

Authors:  Heeyoun Bunch; Brian P Lawney; Adam Burkholder; Duanduan Ma; Xiaofeng Zheng; Shmulik Motola; David C Fargo; Stuart S Levine; Yaoyu E Wang; Guang Hu
Journal:  Genomics       Date:  2016-07-16       Impact factor: 5.736

2.  PHF13: A new player involved in RNA polymerase II transcriptional regulation and co-transcriptional splicing.

Authors:  Alisa Fuchs; Marcos Torroba; Sarah Kinkley
Journal:  Transcription       Date:  2017-01-19

Review 3.  P-TEFb: Finding its ways to release promoter-proximally paused RNA polymerase II.

Authors:  You Li; Min Liu; Lin-Feng Chen; Ruichuan Chen
Journal:  Transcription       Date:  2018-01-12

4.  Tandem Affinity Purification of Protein Complexes from Eukaryotic Cells.

Authors:  Zheng Ma; Victor Fung; Iván D'Orso
Journal:  J Vis Exp       Date:  2017-01-26       Impact factor: 1.355

5.  An evolutionary conserved Hexim1 peptide binds to the Cdk9 catalytic site to inhibit P-TEFb.

Authors:  Lydia Kobbi; Emmanuelle Demey-Thomas; Floriane Braye; Florence Proux; Olga Kolesnikova; Joelle Vinh; Arnaud Poterszman; Olivier Bensaude
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-25       Impact factor: 11.205

6.  The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

Authors:  Tyler B Faust; Yang Li; Curtis W Bacon; Gwendolyn M Jang; Amit Weiss; Bhargavi Jayaraman; Billy W Newton; Nevan J Krogan; Iván D'Orso; Alan D Frankel
Journal:  Elife       Date:  2018-05-30       Impact factor: 8.140

7.  Apobec3A maintains HIV-1 latency through recruitment of epigenetic silencing machinery to the long terminal repeat.

Authors:  Manabu Taura; Eric Song; Ya-Chi Ho; Akiko Iwasaki
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-22       Impact factor: 11.205

8.  Structural basis for recognition of human 7SK long noncoding RNA by the La-related protein Larp7.

Authors:  Catherine D Eichhorn; Yuan Yang; Lucas Repeta; Juli Feigon
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-26       Impact factor: 11.205

Review 9.  Transcription elongation control by the 7SK snRNP complex: Releasing the pause.

Authors:  Ryan P McNamara; Curtis W Bacon; Iván D'Orso
Journal:  Cell Cycle       Date:  2016-05-06       Impact factor: 4.534

10.  PAF1 regulation of promoter-proximal pause release via enhancer activation.

Authors:  Fei Xavier Chen; Peng Xie; Clayton K Collings; Kaixiang Cao; Yuki Aoi; Stacy A Marshall; Emily J Rendleman; Michal Ugarenko; Patrick A Ozark; Anda Zhang; Ramin Shiekhattar; Edwin R Smith; Michael Q Zhang; Ali Shilatifard
Journal:  Science       Date:  2017-08-31       Impact factor: 47.728

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