Literature DB >> 29344776

Dawning of a new era in TRP channel structural biology by cryo-electron microscopy.

M Gregor Madej1, Christine M Ziegler2.   

Abstract

Cryo-electron microscopy (cryo-EM) permits the determination of atomic protein structures by averaging large numbers of individual projection images recorded at cryogenic temperatures-a method termed single-particle analysis. The cryo-preservation traps proteins within a thin glass-like ice layer, making literally a freeze image of proteins in solution. Projections of randomly adopted orientations are merged to reconstruct a 3D density map. While atomic resolution for highly symmetric viruses was achieved already in 2009, the development of new sensitive and fast electron detectors has enabled cryo-EM for smaller and asymmetrical proteins including fragile membrane proteins. As one of the most important structural biology methods at present, cryo-EM was awarded in October 2017 with the Nobel Prize in Chemistry. The molecular understanding of Transient-Receptor-Potential (TRP) channels has been boosted tremendously by cryo-EM single-particle analysis. Several near-atomic and atomic structures gave important mechanistic insights, e.g., into ion permeation and selectivity, gating, as well as into the activation of this enigmatic and medically important membrane protein family by various chemical and physical stimuli. Lastly, these structures have set the starting point for the rational design of TRP channel-targeted therapeutics to counteract life-threatening channelopathies. Here, we attempt a brief introduction to the method, review the latest advances in cryo-EM structure determination of TRP channels, and discuss molecular insights into the channel function based on the wealth of TRP channel cryo-EM structures.

Entities:  

Keywords:  Calcium signaling; Lipid-interactions; Membrane transport; Single particle cryo-EM; Structure; TRP channels

Mesh:

Substances:

Year:  2018        PMID: 29344776     DOI: 10.1007/s00424-018-2107-2

Source DB:  PubMed          Journal:  Pflugers Arch        ISSN: 0031-6768            Impact factor:   3.657


  95 in total

Review 1.  Structure of thermally activated TRP channels.

Authors:  Matthew R Cohen; Vera Y Moiseenkova-Bell
Journal:  Curr Top Membr       Date:  2014       Impact factor: 3.049

Review 2.  Processing of Cryo-EM Movie Data.

Authors:  Z A Ripstein; J L Rubinstein
Journal:  Methods Enzymol       Date:  2016-06-01       Impact factor: 1.600

Review 3.  Single-Particle Cryo-EM at Crystallographic Resolution.

Authors:  Yifan Cheng
Journal:  Cell       Date:  2015-04-23       Impact factor: 41.582

4.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

5.  Structure of TRPV1 channel revealed by electron cryomicroscopy.

Authors:  Vera Y Moiseenkova-Bell; Lia A Stanciu; Irina I Serysheva; Ben J Tobe; Theodore G Wensel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-19       Impact factor: 11.205

Review 6.  Overview and future of single particle electron cryomicroscopy.

Authors:  Richard Henderson
Journal:  Arch Biochem Biophys       Date:  2015-03-18       Impact factor: 4.013

7.  Structural basis of TRPV5 channel inhibition by econazole revealed by cryo-EM.

Authors:  Taylor E T Hughes; David T Lodowski; Kevin W Huynh; Aysenur Yazici; John Del Rosario; Abhijeet Kapoor; Sandip Basak; Amrita Samanta; Xu Han; Sudha Chakrapani; Z Hong Zhou; Marta Filizola; Tibor Rohacs; Seungil Han; Vera Y Moiseenkova-Bell
Journal:  Nat Struct Mol Biol       Date:  2018-01-01       Impact factor: 18.361

Review 8.  The mechanism of translation.

Authors:  Joachim Frank
Journal:  F1000Res       Date:  2017-03-01

Review 9.  Divide and conquer: high resolution structural information on TRP channel fragments.

Authors:  Rachelle Gaudet
Journal:  J Gen Physiol       Date:  2009-03       Impact factor: 4.086

10.  TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.

Authors:  Yuan Gao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Nature       Date:  2016-05-18       Impact factor: 49.962

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  28 in total

Review 1.  Mammalian cold TRP channels: impact on thermoregulation and energy homeostasis.

Authors:  Rosa Señarís; Purificación Ordás; Alfonso Reimúndez; Félix Viana
Journal:  Pflugers Arch       Date:  2018-04-26       Impact factor: 3.657

Review 2.  Transient Receptor Potential Channels and Calcium Signaling.

Authors:  Laura Vangeel; Thomas Voets
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

Review 3.  Potential therapeutic value of transient receptor potential channels in male urogenital system.

Authors:  Gamze Toktanis; Ecem Kaya-Sezginer; Didem Yilmaz-Oral; Serap Gur
Journal:  Pflugers Arch       Date:  2018-09-07       Impact factor: 3.657

4.  Structure-function analyses of the ion channel TRPC3 reveal that its cytoplasmic domain allosterically modulates channel gating.

Authors:  Francisco Sierra-Valdez; Caleigh M Azumaya; Luis O Romero; Terunaga Nakagawa; Julio F Cordero-Morales
Journal:  J Biol Chem       Date:  2018-08-23       Impact factor: 5.157

Review 5.  Structural insights into the gating mechanisms of TRPV channels.

Authors:  Ruth A Pumroy; Edwin C Fluck; Tofayel Ahmed; Vera Y Moiseenkova-Bell
Journal:  Cell Calcium       Date:  2020-01-24       Impact factor: 6.817

6.  Structural insights into TRPM8 inhibition and desensitization.

Authors:  Melinda M Diver; Yifan Cheng; David Julius
Journal:  Science       Date:  2019-09-05       Impact factor: 47.728

7.  Cryo-EM structure of the cytoplasmic domain of murine transient receptor potential cation channel subfamily C member 6 (TRPC6).

Authors:  Caleigh M Azumaya; Francisco Sierra-Valdez; Julio F Cordero-Morales; Terunaga Nakagawa
Journal:  J Biol Chem       Date:  2018-05-11       Impact factor: 5.157

Review 8.  What is new about mild temperature sensing? A review of recent findings.

Authors:  Miriam García-Ávila; León D Islas
Journal:  Temperature (Austin)       Date:  2019-04-29

Review 9.  Organellar TRP channels.

Authors:  Xiaoli Zhang; Meiqin Hu; Yexin Yang; Haoxing Xu
Journal:  Nat Struct Mol Biol       Date:  2018-10-29       Impact factor: 15.369

Review 10.  Transient receptor potential channels in cardiac health and disease.

Authors:  Thomas Hof; Sébastien Chaigne; Alice Récalde; Laurent Sallé; Fabien Brette; Romain Guinamard
Journal:  Nat Rev Cardiol       Date:  2019-06       Impact factor: 32.419

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