| Literature DB >> 26677408 |
Ulrika Roine1, Timo Roine2, Juha Salmi3, Taina Nieminen-von Wendt4, Pekka Tani5, Sami Leppämäki6, Pertti Rintahaka5, Karen Caeyenberghs7, Alexander Leemans8, Mikko Sams1.
Abstract
BACKGROUND: Recent brain imaging findings suggest that there are widely distributed abnormalities affecting the brain connectivity in individuals with autism spectrum disorder (ASD). Using graph theoretical analysis, it is possible to investigate both global and local properties of brain's wiring diagram, i.e., the connectome.Entities:
Keywords: Autism spectrum disorder; Brain networks; Connectivity; Connectome; Diffusion magnetic resonance imaging; Graph theoretical analysis; Tractography; White matter tract
Year: 2015 PMID: 26677408 PMCID: PMC4681075 DOI: 10.1186/s13229-015-0058-4
Source DB: PubMed Journal: Mol Autism Impact factor: 7.509
The network measures used in this study
| Measure | Description |
|---|---|
| Degree and strength | Degree is the number of links of a node and, thus, also the number of neighbors of the node. Strength is a similar measure for weighted networks: the sum of the weights of the links of a node [ |
| Clustering coefficient | Clustering coefficient measures how many of the node’s neighbors are also connected to each other. It is calculated by summing the number of links between the nearest neighbors of the node divided by the maximum possible amount of links between the nearest neighbors [ |
| Characteristic path length | Shortest path length is the minimum number of links that are passed through to get from one node to another node. Characteristic path length is the average of the shortest path lengths between each pair of nodes in the network [ |
| Efficiency | Global efficiency is the average of the inverse shortest path lengths and is primarily influenced by short paths, whereas the characteristic path length is primarily influenced by long paths. Local efficiency is the efficiency of a subgraph formed by the neighborhood of the node [ |
| Betweenness centrality | Betweenness centrality measures the centrality of the node in the network by calculating how many of the network’s shortest paths go through that particular node [ |
| Hubs | Hubs are the nodes with a big strength or a high betweenness centrality (here defined to be higher than mean + two standard deviations). |
Fig. 1The reconstruction of the structural brain networks. a First, a whole-brain constrained spherical deconvolution-based tractography was performed for all subjects. b Then, Automated Anatomical Labeling atlas was used to parcellate the brain into 90 regions. c These regions become the nodes in the brain networks. The size and color of the nodes correspond to the volume of the region in the Automated Anatomical Labeling atlas. d Finally, a link was formed in the brain network, if there was at least one tract between two nodes. The thickness of the links corresponds to the density-weight of the connection, i.e., the number of fibers divided by the mean volume of the two nodes. All of the above steps were performed in the individual space of each subject
Fig. 2The parcellation of the brain. Automated Anatomical Labeling atlas was used to parcellate the brain into 90 regions. The size of the node corresponds to the volume of the region
Results for the global properties of the binary network
| Measures | Patients (mean ± standard deviation) | Controls (mean ± standard deviation) |
|
|---|---|---|---|
| Degree | 19 ± 1.8 | 20 ± 2.2 | 0.12 |
| Normalized clustering coefficient | 1.5 ± 0.079 | 1.5 ± 0.083 | 0.98 |
| Normalized characteristic path length | 1.1 ± 0.014 | 1.0 ± 0.0083 | 0.042 |
| Global efficiency | 0.58 ± 0.020 | 0.59 ± 0.017 | 0.042 |
Results for the global properties of the density-weighted network
| Measures | Patients (mean ± standard deviation) | Controls (mean ± standard deviation) |
|
|---|---|---|---|
| Strength | 6.6e−05 ± 5.1e−06 | 7.3e−05 ± 6.3e−06 | 0.0024 |
| Normalized clustering coefficient | 1.6 ± 0.088 | 1.6 ± 0.10 | 0.90 |
| Normalized characteristic path length | 1.1 ± 3.4e−02 | 1.1 ± 4.5e−02 | 0.22 |
| Global efficiency | 2.3e−06 ± 1.7e−07 | 2.5e−06 ± 1.6e−07 | 0.014 |
Fig. 3Local results in the binary networks. In the binary network, subjects with ASD had significantly higher betweenness centrality in the right caudate (green node) than the control subjects. The size of the nodes reflects the betweenness centrality of the node. The hubs are marked in blue. Abbreviations: L = left, R = right, Frontal Sup Medial = superior frontal gyrus, medial part, Frontal Sup = superior frontal gyrus, dorsolateral part, Temporal Pole Sup = temporal pole, superior temporal gyrus
Fig. 4Local results in the weighted networks. In the density-weighted network, the strength of the right superior temporal pole (green node) was significantly lower in subjects with ASD than in control subjects. The size of the nodes reflects the strength of the node. The hubs are marked in blue. Abbreviations: L = left, R = right, Temporal Pole Sup = temporal pole, superior temporal gyrus