Literature DB >> 26671708

Parallel Evolution of Chemokine Binding by Structurally Related Herpesvirus Decoy Receptors.

Olga Y Lubman1, Daved H Fremont2.   

Abstract

A wide variety of pathogens targets chemokine signaling networks in order to disrupt host immune surveillance and defense. Here, we report a structural and mutational analysis of rodent herpesvirus Peru encoded R17, a potent chemokine inhibitor that sequesters CC and C chemokines with high affinity. R17 consists of a pair of β-sandwich domains linked together by a bridging sheet, which form an acidic binding cleft for the chemokine CCL3 on the opposite face of a basic surface cluster that binds glycosaminoglycans. R17 promiscuously engages chemokines primarily through the same N-loop determinants used for host receptor recognition while residues located in the chemokine 40s loop drive kinetically stable complex formation. The core fold adopted by R17 is unexpectedly similar to that of the M3 chemokine decoy receptor encoded by MHV-68, although, strikingly, neither the location of ligand engagement nor the stoichiometry of binding is conserved, suggesting that their functions evolved independently.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26671708      PMCID: PMC7039123          DOI: 10.1016/j.str.2015.10.018

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  66 in total

1.  CC chemokine MIP-1 beta can function as a monomer and depends on Phe13 for receptor binding.

Authors:  J S Laurence; C Blanpain; J W Burgner; M Parmentier; P J LiWang
Journal:  Biochemistry       Date:  2000-03-28       Impact factor: 3.162

Review 2.  Chemokines and disease.

Authors:  C Gerard; B J Rollins
Journal:  Nat Immunol       Date:  2001-02       Impact factor: 25.606

3.  Structural comparison of monomeric variants of the chemokine MIP-1beta having differing ability to bind the receptor CCR5.

Authors:  S Kim; S Jao; J S Laurence; P J LiWang
Journal:  Biochemistry       Date:  2001-09-11       Impact factor: 3.162

4.  DNA sequence of the gene encoding a major secreted protein of vaccinia virus, strain Lister.

Authors:  A H Patel; D F Gaffney; J H Subak-Sharpe; N D Stow
Journal:  J Gen Virol       Date:  1990-09       Impact factor: 3.891

5.  The interdependence of wavelength, redundancy and dose in sulfur SAD experiments.

Authors:  Michele Cianci; John R Helliwell; Atsuo Suzuki
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-11-18

6.  Collaborative Computational Project, number 4: providing programs for protein crystallography.

Authors:  E J Dodson; M Winn; A Ralph
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

7.  Structural biology. Crystal structure of the chemokine receptor CXCR4 in complex with a viral chemokine.

Authors:  Ling Qin; Irina Kufareva; Lauren G Holden; Chong Wang; Yi Zheng; Chunxia Zhao; Gustavo Fenalti; Huixian Wu; Gye Won Han; Vadim Cherezov; Ruben Abagyan; Raymond C Stevens; Tracy M Handel
Journal:  Science       Date:  2015-01-22       Impact factor: 47.728

8.  Iodide-SAD, SIR and SIRAS phasing for structure solution of a nucleosome assembly protein.

Authors:  Manickam Yogavel; Jasmita Gill; Amit Sharma
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-05-15

9.  Glycoprotein structural genomics: solving the glycosylation problem.

Authors:  Veronica T Chang; Max Crispin; A Radu Aricescu; David J Harvey; Joanne E Nettleship; Janet A Fennelly; Chao Yu; Kent S Boles; Edward J Evans; David I Stuart; Raymond A Dwek; E Yvonne Jones; Raymond J Owens; Simon J Davis
Journal:  Structure       Date:  2007-03       Impact factor: 5.006

10.  The murine gammaherpesvirus immediate-early Rta synergizes with IRF4, targeting expression of the viral M1 superantigen to plasma cells.

Authors:  Brigid M O'Flaherty; Tanushree Soni; Brian S Wakeman; Samuel H Speck
Journal:  PLoS Pathog       Date:  2014-08-07       Impact factor: 6.823

View more
  10 in total

1.  Functional anatomy of the full-length CXCR4-CXCL12 complex systematically dissected by quantitative model-guided mutagenesis.

Authors:  Bryan S Stephens; Tony Ngo; Irina Kufareva; Tracy M Handel
Journal:  Sci Signal       Date:  2020-07-14       Impact factor: 8.192

Review 2.  What Do Structures Tell Us About Chemokine Receptor Function and Antagonism?

Authors:  Irina Kufareva; Martin Gustavsson; Yi Zheng; Bryan S Stephens; Tracy M Handel
Journal:  Annu Rev Biophys       Date:  2017-05-22       Impact factor: 12.981

Review 3.  Mechanisms of immunomodulation by mammalian and viral decoy receptors: insights from structures.

Authors:  Jan Felix; Savvas N Savvides
Journal:  Nat Rev Immunol       Date:  2016-12-28       Impact factor: 53.106

Review 4.  Chemokines and their receptors: insights from molecular modeling and crystallography.

Authors:  Irina Kufareva
Journal:  Curr Opin Pharmacol       Date:  2016-07-25       Impact factor: 5.547

5.  Tyrosine sulfation and O-glycosylation of chemoattractant receptor GPR15 differentially regulate interaction with GPR15L.

Authors:  Yukari Okamoto; Sojin Shikano
Journal:  J Cell Sci       Date:  2021-04-22       Impact factor: 5.285

6.  Yeast surface display identifies a family of evasins from ticks with novel polyvalent CC chemokine-binding activities.

Authors:  Kamayani Singh; Graham Davies; Yara Alenazi; James R O Eaton; Akane Kawamura; Shoumo Bhattacharya
Journal:  Sci Rep       Date:  2017-06-27       Impact factor: 4.379

7.  Genetically engineered two-warhead evasins provide a method to achieve precision targeting of disease-relevant chemokine subsets.

Authors:  Yara Alenazi; Kamayani Singh; Graham Davies; James R O Eaton; Philip Elders; Akane Kawamura; Shoumo Bhattacharya
Journal:  Sci Rep       Date:  2018-04-20       Impact factor: 4.379

8.  The N-terminal domain of a tick evasin is critical for chemokine binding and neutralization and confers specific binding activity to other evasins.

Authors:  James R O Eaton; Yara Alenazi; Kamayani Singh; Graham Davies; Lucia Geis-Asteggiante; Benedikt Kessler; Carol V Robinson; Akane Kawamura; Shoumo Bhattacharya
Journal:  J Biol Chem       Date:  2018-02-27       Impact factor: 5.157

Review 9.  Targeting Chemokine-Glycosaminoglycan Interactions to Inhibit Inflammation.

Authors:  Helena Crijns; Vincent Vanheule; Paul Proost
Journal:  Front Immunol       Date:  2020-03-31       Impact factor: 7.561

Review 10.  The binding and specificity of chemokine binding proteins, through the lens of experiment and computation.

Authors:  Lauren E Stark; Wenyan Guan; Michael E Colvin; Patricia J LiWang
Journal:  Biomed J       Date:  2021-07-24       Impact factor: 7.892

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.