Literature DB >> 28532213

What Do Structures Tell Us About Chemokine Receptor Function and Antagonism?

Irina Kufareva1, Martin Gustavsson1, Yi Zheng1, Bryan S Stephens1, Tracy M Handel1.   

Abstract

Chemokines and their cell surface G protein-coupled receptors are critical for cell migration, not only in many fundamental biological processes but also in inflammatory diseases and cancer. Recent X-ray structures of two chemokines complexed with full-length receptors provided unprecedented insight into the atomic details of chemokine recognition and receptor activation, and computational modeling informed by new experiments leverages these insights to gain understanding of many more receptor:chemokine pairs. In parallel, chemokine receptor structures with small molecules reveal the complicated and diverse structural foundations of small molecule antagonism and allostery, highlight the inherent physicochemical challenges of receptor:chemokine interfaces, and suggest novel epitopes that can be exploited to overcome these challenges. The structures and models promote unique understanding of chemokine receptor biology, including the interpretation of two decades of experimental studies, and will undoubtedly assist future drug discovery endeavors.

Entities:  

Keywords:  G protein–coupled receptor; allostery; crystallography; druggability; molecular modeling; receptor activation

Mesh:

Substances:

Year:  2017        PMID: 28532213      PMCID: PMC5764094          DOI: 10.1146/annurev-biophys-051013-022942

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  148 in total

1.  Structure-based ligand discovery for the protein-protein interface of chemokine receptor CXCR4.

Authors:  Michael M Mysinger; Dahlia R Weiss; Joshua J Ziarek; Stéphanie Gravel; Allison K Doak; Joel Karpiak; Nikolaus Heveker; Brian K Shoichet; Brian F Volkman
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-19       Impact factor: 11.205

2.  Recognition of a CXCR4 sulfotyrosine by the chemokine stromal cell-derived factor-1alpha (SDF-1alpha/CXCL12).

Authors:  Christopher T Veldkamp; Christoph Seibert; Francis C Peterson; Thomas P Sakmar; Brian F Volkman
Journal:  J Mol Biol       Date:  2006-05-11       Impact factor: 5.469

Review 3.  The structural role of receptor tyrosine sulfation in chemokine recognition.

Authors:  Justin P Ludeman; Martin J Stone
Journal:  Br J Pharmacol       Date:  2014-03       Impact factor: 8.739

4.  Design and receptor interactions of obligate dimeric mutant of chemokine monocyte chemoattractant protein-1 (MCP-1).

Authors:  Joshua H Y Tan; Meritxell Canals; Justin P Ludeman; Jamie Wedderburn; Christopher Boston; Stephen J Butler; Ann Marie Carrick; Todd R Parody; Deni Taleski; Arthur Christopoulos; Richard J Payne; Martin J Stone
Journal:  J Biol Chem       Date:  2012-03-06       Impact factor: 5.157

5.  CXCL1/MGSA Is a Novel Glycosaminoglycan (GAG)-binding Chemokine: STRUCTURAL EVIDENCE FOR TWO DISTINCT NON-OVERLAPPING BINDING DOMAINS.

Authors:  Krishna Mohan Sepuru; Krishna Rajarathnam
Journal:  J Biol Chem       Date:  2015-12-31       Impact factor: 5.157

6.  Identification of residues in the monocyte chemotactic protein-1 that contact the MCP-1 receptor, CCR2.

Authors:  S Hemmerich; C Paavola; A Bloom; S Bhakta; R Freedman; D Grunberger; J Krstenansky; S Lee; D McCarley; M Mulkins; B Wong; J Pease; L Mizoue; T Mirzadegan; I Polsky; K Thompson; T M Handel; K Jarnagin
Journal:  Biochemistry       Date:  1999-10-05       Impact factor: 3.162

Review 7.  Nanobody stabilization of G protein-coupled receptor conformational states.

Authors:  Jan Steyaert; Brian K Kobilka
Journal:  Curr Opin Struct Biol       Date:  2011-07-21       Impact factor: 6.809

8.  Tyrosine sulfation of chemokine receptor CCR2 enhances interactions with both monomeric and dimeric forms of the chemokine monocyte chemoattractant protein-1 (MCP-1).

Authors:  Joshua H Y Tan; Justin P Ludeman; Jamie Wedderburn; Meritxell Canals; Pam Hall; Stephen J Butler; Deni Taleski; Arthur Christopoulos; Michael J Hickey; Richard J Payne; Martin J Stone
Journal:  J Biol Chem       Date:  2013-02-13       Impact factor: 5.157

9.  Signal transmission through the CXC chemokine receptor 4 (CXCR4) transmembrane helices.

Authors:  Melanie P Wescott; Irina Kufareva; Cheryl Paes; Jason R Goodman; Yana Thaker; Bridget A Puffer; Eli Berdougo; Joseph B Rucker; Tracy M Handel; Benjamin J Doranz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-19       Impact factor: 11.205

10.  The High-Resolution Structure of Activated Opsin Reveals a Conserved Solvent Network in the Transmembrane Region Essential for Activation.

Authors:  Elise Blankenship; Ardeschir Vahedi-Faridi; David T Lodowski
Journal:  Structure       Date:  2015-10-29       Impact factor: 5.006

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  33 in total

1.  Functional anatomy of the full-length CXCR4-CXCL12 complex systematically dissected by quantitative model-guided mutagenesis.

Authors:  Bryan S Stephens; Tony Ngo; Irina Kufareva; Tracy M Handel
Journal:  Sci Signal       Date:  2020-07-14       Impact factor: 8.192

2.  Structure of monomeric Interleukin-8 and its interactions with the N-terminal Binding Site-I of CXCR1 by solution NMR spectroscopy.

Authors:  Sabrina Berkamp; Sang Ho Park; Anna A De Angelis; Francesca M Marassi; Stanley J Opella
Journal:  J Biomol NMR       Date:  2017-11-15       Impact factor: 2.835

3.  The chemokine X-factor: Structure-function analysis of the CXC motif at CXCR4 and ACKR3.

Authors:  Michael J Wedemeyer; Sarah A Mahn; Anthony E Getschman; Kyler S Crawford; Francis C Peterson; Adriano Marchese; John D McCorvy; Brian F Volkman
Journal:  J Biol Chem       Date:  2020-08-11       Impact factor: 5.157

4.  Modeling the complete chemokine-receptor interaction.

Authors:  Michael J Wedemeyer; Benjamin K Mueller; Brian J Bender; Jens Meiler; Brian F Volkman
Journal:  Methods Cell Biol       Date:  2018-11-01       Impact factor: 1.441

5.  Molecular insights into mechanisms of GPCR hijacking by Staphylococcus aureus.

Authors:  Claire M Grison; Paul Lambey; Sylvain Jeannot; Elise Del Nero; Simon Fontanel; Fanny Peysson; Joyce Heuninck; Rémy Sounier; Thierry Durroux; Cédric Leyrat; Sébastien Granier; Cherine Bechara
Journal:  Proc Natl Acad Sci U S A       Date:  2021-10-19       Impact factor: 11.205

6.  Engineering Salt Bridge Networks between Transmembrane Helices Confers Thermostability in G-Protein-Coupled Receptors.

Authors:  Soumadwip Ghosh; Tobias Bierig; Sangbae Lee; Suvamay Jana; Adelheid Löhle; Gisela Schnapp; Christofer S Tautermann; Nagarajan Vaidehi
Journal:  J Chem Theory Comput       Date:  2018-11-06       Impact factor: 6.006

7.  Kinetics of CXCL12 binding to atypical chemokine receptor 3 reveal a role for the receptor N terminus in chemokine binding.

Authors:  Martin Gustavsson; Douglas P Dyer; Chunxia Zhao; Tracy M Handel
Journal:  Sci Signal       Date:  2019-09-10       Impact factor: 8.192

8.  Differential activity and selectivity of N-terminal modified CXCL12 chemokines at the CXCR4 and ACKR3 receptors.

Authors:  Agnieszka Jaracz-Ros; Guillaume Bernadat; Pasquale Cutolo; Carmen Gallego; Martin Gustavsson; Erika Cecon; Françoise Baleux; Irina Kufareva; Tracy M Handel; Françoise Bachelerie; Angélique Levoye
Journal:  J Leukoc Biol       Date:  2020-05-06       Impact factor: 4.962

9.  Biased action of the CXCR4-targeting drug plerixafor is essential for its superior hematopoietic stem cell mobilization.

Authors:  Astrid S Jørgensen; Viktorija Daugvilaite; Katia De Filippo; Christian Berg; Masa Mavri; Tau Benned-Jensen; Goda Juzenaite; Gertrud Hjortø; Sara Rankin; Jon Våbenø; Mette M Rosenkilde
Journal:  Commun Biol       Date:  2021-05-12

Review 10.  Ligand bias in receptor tyrosine kinase signaling.

Authors:  Kelly Karl; Michael D Paul; Elena B Pasquale; Kalina Hristova
Journal:  J Biol Chem       Date:  2020-10-29       Impact factor: 5.157

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