Literature DB >> 27459124

Chemokines and their receptors: insights from molecular modeling and crystallography.

Irina Kufareva1.   

Abstract

Chemokines are small secreted proteins that direct cell migration in development, immunity, inflammation, and cancer. They do so by binding and activating specific G protein coupled receptors on the surface of migrating cells. Despite the importance of receptor:chemokine interactions, their structural basis remained unclear for a long time. In 2015, the first atomic resolution insights were obtained with the publication of X-ray structures for two distantly related receptors bound to chemokines. In conjunction with experiment-guided molecular modeling, the structures suggest a conserved receptor:chemokine complex architecture, while highlighting the diverse details and functional roles of individual interaction epitopes. Novel findings promote the development and detailed structural interpretation of the canonical two-site hypothesis of receptor:chemokine recognition, and suggest new avenues for pharmacological modulation of chemokine receptors.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27459124      PMCID: PMC5071139          DOI: 10.1016/j.coph.2016.07.006

Source DB:  PubMed          Journal:  Curr Opin Pharmacol        ISSN: 1471-4892            Impact factor:   5.547


  68 in total

1.  The importance of ligands for G protein-coupled receptor stability.

Authors:  Xianjun Zhang; Raymond C Stevens; Fei Xu
Journal:  Trends Biochem Sci       Date:  2015-01-15       Impact factor: 13.807

2.  Disulfide Trapping for Modeling and Structure Determination of Receptor: Chemokine Complexes.

Authors:  Irina Kufareva; Martin Gustavsson; Lauren G Holden; Ling Qin; Yi Zheng; Tracy M Handel
Journal:  Methods Enzymol       Date:  2016-01-13       Impact factor: 1.600

3.  A novel peptide antagonist of CXCR4 derived from the N-terminus of viral chemokine vMIP-II.

Authors:  N Zhou; Z Luo; J Luo; J W Hall; Z Huang
Journal:  Biochemistry       Date:  2000-04-04       Impact factor: 3.162

4.  Identification of surface residues of the monocyte chemotactic protein 1 that affect signaling through the receptor CCR2.

Authors:  K Jarnagin; D Grunberger; M Mulkins; B Wong; S Hemmerich; C Paavola; A Bloom; S Bhakta; F Diehl; R Freedman; D McCarley; I Polsky; A Ping-Tsou; A Kosaka; T M Handel
Journal:  Biochemistry       Date:  1999-12-07       Impact factor: 3.162

5.  Identification of residues in the monocyte chemotactic protein-1 that contact the MCP-1 receptor, CCR2.

Authors:  S Hemmerich; C Paavola; A Bloom; S Bhakta; R Freedman; D Grunberger; J Krstenansky; S Lee; D McCarley; M Mulkins; B Wong; J Pease; L Mizoue; T Mirzadegan; I Polsky; K Thompson; T M Handel; K Jarnagin
Journal:  Biochemistry       Date:  1999-10-05       Impact factor: 3.162

6.  Highly potent HIV inhibition: engineering a key anti-HIV structure from PSC-RANTES into MIP-1 beta/CCL4.

Authors:  Hubert Gaertner; Olivier Lebeau; Irène Borlat; Fabrice Cerini; Brigitte Dufour; Gabriel Kuenzi; Astrid Melotti; Richard J Fish; Robin Offord; Jean-Yves Springael; Marc Parmentier; Oliver Hartley
Journal:  Protein Eng Des Sel       Date:  2008-01-04       Impact factor: 1.650

7.  Signal transmission through the CXC chemokine receptor 4 (CXCR4) transmembrane helices.

Authors:  Melanie P Wescott; Irina Kufareva; Cheryl Paes; Jason R Goodman; Yana Thaker; Bridget A Puffer; Eli Berdougo; Joseph B Rucker; Tracy M Handel; Benjamin J Doranz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-19       Impact factor: 11.205

8.  Mutation of Leu25 and Val27 introduces CC chemokine activity into interleukin-8.

Authors:  M Lusti-Narasimhan; C A Power; B Allet; S Alouani; K B Bacon; J J Mermod; A E Proudfoot; T N Wells
Journal:  J Biol Chem       Date:  1995-02-10       Impact factor: 5.157

9.  Tumoral Immune Cell Exploitation in Colorectal Cancer Metastases Can Be Targeted Effectively by Anti-CCR5 Therapy in Cancer Patients.

Authors:  Niels Halama; Inka Zoernig; Anna Berthel; Christoph Kahlert; Fee Klupp; Meggy Suarez-Carmona; Thomas Suetterlin; Karsten Brand; Juergen Krauss; Felix Lasitschka; Tina Lerchl; Claudia Luckner-Minden; Alexis Ulrich; Moritz Koch; Juergen Weitz; Martin Schneider; Markus W Buechler; Laurence Zitvogel; Thomas Herrmann; Axel Benner; Christina Kunz; Stephan Luecke; Christoph Springfeld; Niels Grabe; Christine S Falk; Dirk Jaeger
Journal:  Cancer Cell       Date:  2016-04-11       Impact factor: 31.743

Review 10.  Biased and g protein-independent signaling of chemokine receptors.

Authors:  Anne Steen; Olav Larsen; Stefanie Thiele; Mette M Rosenkilde
Journal:  Front Immunol       Date:  2014-06-23       Impact factor: 7.561

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  19 in total

1.  Functional anatomy of the full-length CXCR4-CXCL12 complex systematically dissected by quantitative model-guided mutagenesis.

Authors:  Bryan S Stephens; Tony Ngo; Irina Kufareva; Tracy M Handel
Journal:  Sci Signal       Date:  2020-07-14       Impact factor: 8.192

Review 2.  What Do Structures Tell Us About Chemokine Receptor Function and Antagonism?

Authors:  Irina Kufareva; Martin Gustavsson; Yi Zheng; Bryan S Stephens; Tracy M Handel
Journal:  Annu Rev Biophys       Date:  2017-05-22       Impact factor: 12.981

Review 3.  Syndecans in chronic inflammatory and autoimmune diseases: Pathological insights and therapeutic opportunities.

Authors:  Solomon A Agere; Eugene Y Kim; Nahid Akhtar; Salahuddin Ahmed
Journal:  J Cell Physiol       Date:  2018-03-25       Impact factor: 6.384

4.  Modeling the complete chemokine-receptor interaction.

Authors:  Michael J Wedemeyer; Benjamin K Mueller; Brian J Bender; Jens Meiler; Brian F Volkman
Journal:  Methods Cell Biol       Date:  2018-11-01       Impact factor: 1.441

Review 5.  Structural Analysis of Chemokine Receptor-Ligand Interactions.

Authors:  Marta Arimont; Shan-Liang Sun; Rob Leurs; Martine Smit; Iwan J P de Esch; Chris de Graaf
Journal:  J Med Chem       Date:  2017-03-10       Impact factor: 7.446

6.  The solution structure of monomeric CCL5 in complex with a doubly sulfated N-terminal segment of CCR5.

Authors:  Meital Abayev; João P G L M Rodrigues; Gautam Srivastava; Boris Arshava; Łukasz Jaremko; Mariusz Jaremko; Fred Naider; Michael Levitt; Jacob Anglister
Journal:  FEBS J       Date:  2018-04-20       Impact factor: 5.542

7.  Gene Expression Profiling of Chemokines and Their Receptors in Low and High Grade Astrocytoma

Authors:  Ira Sharma; Avninder Singh; Karam Chand Sharma; Sunita Saxena
Journal:  Asian Pac J Cancer Prev       Date:  2017-05-01

8.  Yeast surface display identifies a family of evasins from ticks with novel polyvalent CC chemokine-binding activities.

Authors:  Kamayani Singh; Graham Davies; Yara Alenazi; James R O Eaton; Akane Kawamura; Shoumo Bhattacharya
Journal:  Sci Rep       Date:  2017-06-27       Impact factor: 4.379

9.  Structural Basis of Native CXCL7 Monomer Binding to CXCR2 Receptor N-Domain and Glycosaminoglycan Heparin.

Authors:  Aaron J Brown; Krishna Mohan Sepuru; Krishna Rajarathnam
Journal:  Int J Mol Sci       Date:  2017-02-26       Impact factor: 5.923

10.  The N-terminal domain of a tick evasin is critical for chemokine binding and neutralization and confers specific binding activity to other evasins.

Authors:  James R O Eaton; Yara Alenazi; Kamayani Singh; Graham Davies; Lucia Geis-Asteggiante; Benedikt Kessler; Carol V Robinson; Akane Kawamura; Shoumo Bhattacharya
Journal:  J Biol Chem       Date:  2018-02-27       Impact factor: 5.157

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