Literature DB >> 26612270

Regulation of bacterial gene expression by ribosome stalling and rescuing.

Yongxin Jin1, Shouguang Jin1,2, Weihui Wu3.   

Abstract

Ribosome is responsible for protein synthesis and is able to monitor the sequence and structure of the nascent peptide. Such ability plays an important role in determining overall gene expression profile of the bacteria through ribosome stalling and rescuing. In this review, we briefly summarize our current understanding of the regulation of gene expression through ribosome stalling and rescuing in bacteria, as well as mechanisms that modulate ribosome activity. Understanding the mechanisms of how bacteria modulate ribosome activity will provide not only fundamental insights into bacterial gene regulation, but also new candidate targets for the development of novel antimicrobial agents.

Keywords:  Gene regulation; Ribosome rescuing; Ribosome stalling; SuhB

Mesh:

Substances:

Year:  2015        PMID: 26612270     DOI: 10.1007/s00294-015-0545-3

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  43 in total

1.  The ribosomal exit tunnel functions as a discriminating gate.

Authors:  Hitoshi Nakatogawa; Koreaki Ito
Journal:  Cell       Date:  2002-03-08       Impact factor: 41.582

Review 2.  The tmRNA system for translational surveillance and ribosome rescue.

Authors:  Sean D Moore; Robert T Sauer
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

3.  Antibiotic inducibility of the MexXY multidrug efflux system of Pseudomonas aeruginosa: involvement of the antibiotic-inducible PA5471 gene product.

Authors:  Yuji Morita; Mara L Sobel; Keith Poole
Journal:  J Bacteriol       Date:  2006-03       Impact factor: 3.490

4.  SuhB is a novel ribosome associated protein that regulates expression of MexXY by modulating ribosome stalling in Pseudomonas aeruginosa.

Authors:  Jing Shi; Yongxin Jin; Ting Bian; Kewei Li; Ziyu Sun; Zhihui Cheng; Shouguang Jin; Weihui Wu
Journal:  Mol Microbiol       Date:  2015-08-03       Impact factor: 3.501

5.  PoxA, yjeK, and elongation factor P coordinately modulate virulence and drug resistance in Salmonella enterica.

Authors:  William Wiley Navarre; S Betty Zou; Hervé Roy; Jinglin Lucy Xie; Alexei Savchenko; Alexander Singer; Elena Edvokimova; Lynne R Prost; Runjun Kumar; Michael Ibba; Ferric C Fang
Journal:  Mol Cell       Date:  2010-07-30       Impact factor: 17.970

6.  Translation elongation factor EF-P alleviates ribosome stalling at polyproline stretches.

Authors:  Susanne Ude; Jürgen Lassak; Agata L Starosta; Tobias Kraxenberger; Daniel N Wilson; Kirsten Jung
Journal:  Science       Date:  2012-12-13       Impact factor: 47.728

Review 7.  The bacterial translation stress response.

Authors:  Agata L Starosta; Jürgen Lassak; Kirsten Jung; Daniel N Wilson
Journal:  FEMS Microbiol Rev       Date:  2014-09-26       Impact factor: 16.408

8.  Analysis of an Escherichia coli dnaB temperature-sensitive insertion mutation and its cold-sensitive extragenic suppressor.

Authors:  S F Chang; D Ng; L Baird; C Georgopoulos
Journal:  J Biol Chem       Date:  1991-02-25       Impact factor: 5.157

9.  Lon protease degrades transfer-messenger RNA-tagged proteins.

Authors:  Jennifer S Choy; Latt Latt Aung; A Wali Karzai
Journal:  J Bacteriol       Date:  2007-07-06       Impact factor: 3.490

10.  SuhB is a regulator of multiple virulence genes and essential for pathogenesis of Pseudomonas aeruginosa.

Authors:  Kewei Li; Chang Xu; Yongxin Jin; Ziyu Sun; Chang Liu; Jing Shi; Gukui Chen; Ronghao Chen; Shouguang Jin; Weihui Wu
Journal:  MBio       Date:  2013-10-29       Impact factor: 7.867

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  5 in total

Review 1.  The ribosome-bound quality control complex: from aberrant peptide clearance to proteostasis maintenance.

Authors:  Quentin Defenouillère; Micheline Fromont-Racine
Journal:  Curr Genet       Date:  2017-05-20       Impact factor: 3.886

Review 2.  Visualizing translational errors: one cell at a time.

Authors:  Christopher R Evans; Jiqiang Ling
Journal:  Curr Genet       Date:  2017-11-20       Impact factor: 3.886

3.  HigB of Pseudomonas aeruginosa Enhances Killing of Phagocytes by Up-Regulating the Type III Secretion System in Ciprofloxacin Induced Persister Cells.

Authors:  Mei Li; Yuqing Long; Ying Liu; Yang Liu; Ronghao Chen; Jing Shi; Lu Zhang; Yongxin Jin; Liang Yang; Fang Bai; Shouguang Jin; Zhihui Cheng; Weihui Wu
Journal:  Front Cell Infect Microbiol       Date:  2016-10-14       Impact factor: 5.293

4.  HigB Reciprocally Controls Biofilm Formation and the Expression of Type III Secretion System Genes through Influencing the Intracellular c-di-GMP Level in Pseudomonas aeruginosa.

Authors:  Yueying Zhang; Bin Xia; Mei Li; Jing Shi; Yuqing Long; Yongxin Jin; Fang Bai; Zhihui Cheng; Shouguang Jin; Weihui Wu
Journal:  Toxins (Basel)       Date:  2018-10-24       Impact factor: 4.546

Review 5.  How Does Bacillus thuringiensis Crystallize Such a Large Diversity of Toxins?

Authors:  Guillaume Tetreau; Elena A Andreeva; Anne-Sophie Banneville; Elke De Zitter; Jacques-Philippe Colletier
Journal:  Toxins (Basel)       Date:  2021-06-26       Impact factor: 4.546

  5 in total

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