Literature DB >> 11893334

The ribosomal exit tunnel functions as a discriminating gate.

Hitoshi Nakatogawa1, Koreaki Ito.   

Abstract

Translation of SecM stalls unless its N-terminal part is "pulled" by the protein export machinery. Here we show that the sequence motif FXXXXWIXXXXGIRAGP that includes a specific arrest point (Pro) causes elongation arrest within the ribosome. Mutations that bypass the elongation arrest were isolated in 23S rRNA and L22 r protein. Such suppressor mutations occurred at a few specific residues of these components, which all face the narrowest constriction of the ribosomal exit tunnel. Thus, we suggest that this region of the exit tunnel interacts with nascent translation products and functions as a discriminating gate.

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Year:  2002        PMID: 11893334     DOI: 10.1016/s0092-8674(02)00649-9

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  207 in total

1.  The C-terminal amino acid sequence of nascent peptide is a major determinant of SsrA tagging at all three stop codons.

Authors:  Takafumi Sunohara; Tatsuhiko Abo; Toshifumi Inada; Hiroji Aiba
Journal:  RNA       Date:  2002-11       Impact factor: 4.942

2.  The translational regulatory function of SecM requires the precise timing of membrane targeting.

Authors:  Mee-Ngan Yap; Harris D Bernstein
Journal:  Mol Microbiol       Date:  2011-06-03       Impact factor: 3.501

3.  Inhibition of translation termination mediated by an interaction of eukaryotic release factor 1 with a nascent peptidyl-tRNA.

Authors:  Deanna M Janzen; Lyudmila Frolova; Adam P Geballe
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

4.  Translocon "pulling" of nascent SecM controls the duration of its translational pause and secretion-responsive secA regulation.

Authors:  Martha E Butkus; Lucia B Prundeanu; Donald B Oliver
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

5.  The extended loops of ribosomal proteins L4 and L22 are not required for ribosome assembly or L4-mediated autogenous control.

Authors:  Janice M Zengel; Adam Jerauld; Andre Walker; Markus C Wahl; Lasse Lindahl
Journal:  RNA       Date:  2003-10       Impact factor: 4.942

6.  Trigger factor binds to ribosome-signal-recognition particle (SRP) complexes and is excluded by binding of the SRP receptor.

Authors:  Iwona Buskiewicz; Elke Deuerling; Shan-Qing Gu; Johannes Jöckel; Marina V Rodnina; Bernd Bukau; Wolfgang Wintermeyer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-17       Impact factor: 11.205

7.  Translation arrest of SecM is essential for the basal and regulated expression of SecA.

Authors:  Akiko Murakami; Hitoshi Nakatogawa; Koreaki Ito
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-09       Impact factor: 11.205

8.  Creating ribosomes with an all-RNA 30S subunit P site.

Authors:  Lee Hoang; Kurt Fredrick; Harry F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-12       Impact factor: 11.205

9.  Ras Suppresses TXNIP Expression by Restricting Ribosome Translocation.

Authors:  Zhizhou Ye; Donald E Ayer
Journal:  Mol Cell Biol       Date:  2018-09-28       Impact factor: 4.272

10.  Mss51p promotes mitochondrial Cox1p synthesis and interacts with newly synthesized Cox1p.

Authors:  Xochitl Perez-Martinez; Sarah A Broadley; Thomas D Fox
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

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