Literature DB >> 29159424

Visualizing translational errors: one cell at a time.

Christopher R Evans1,2, Jiqiang Ling3,4.   

Abstract

Physiological heterogeneity among single cells with identical genetic information has been observed in a large number of bacterial phenotypes, including growth, stress responses, cell size, and antibiotic tolerance. Despite the widespread observation of this phenomenon in bacterial populations, not much is known about the molecular mechanisms behind phenotypic heterogeneity. Currently, our understanding is primarily limited to transcriptional profile of single cells using fluorescence reporters. Although the development of these tools has been extremely informative, it cannot fully explain the heterogeneity seen in populations. In a recent publication, Fan et al. have developed a dual-fluorescent reporter system that is capable of quantitatively measuring translational fidelity in single cells. It is shown that translational fidelity is heterogeneous and affects the growth characteristics of single cells. The development of tools for analysis of molecular heterogeneity downstream of transcription may play an important role in advancing our understanding of the physiology of bacterial populations.

Entities:  

Keywords:  Genetic code; Protein synthesis; Single cell

Mesh:

Year:  2017        PMID: 29159424      PMCID: PMC5949073          DOI: 10.1007/s00294-017-0784-6

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  30 in total

1.  Quantifying E. coli proteome and transcriptome with single-molecule sensitivity in single cells.

Authors:  Yuichi Taniguchi; Paul J Choi; Gene-Wei Li; Huiyi Chen; Mohan Babu; Jeremy Hearn; Andrew Emili; X Sunney Xie
Journal:  Science       Date:  2010-07-30       Impact factor: 47.728

Review 2.  Protein mistranslation: friend or foe?

Authors:  Liuís Ribas de Pouplana; Manuel A S Santos; Jun-Hao Zhu; Philip J Farabaugh; Babak Javid
Journal:  Trends Biochem Sci       Date:  2014-07-08       Impact factor: 13.807

3.  Stochastic induction of persister cells by HipA through (p)ppGpp-mediated activation of mRNA endonucleases.

Authors:  Elsa Germain; Mohammad Roghanian; Kenn Gerdes; Etienne Maisonneuve
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

4.  The essential mycobacterial amidotransferase GatCAB is a modulator of specific translational fidelity.

Authors:  Hong-Wei Su; Jun-Hao Zhu; Hao Li; Rong-Jun Cai; Christopher Ealand; Xun Wang; Yu-Xiang Chen; Masood Ur Rehman Kayani; Ting F Zhu; Danesh Moradigaravand; Hairong Huang; Bavesh D Kana; Babak Javid
Journal:  Nat Microbiol       Date:  2016-08-26       Impact factor: 17.745

5.  A rapid, inexpensive yeast-based dual-fluorescence assay of programmed--1 ribosomal frameshifting for high-throughput screening.

Authors:  Rasa Rakauskaite; Pei-Yu Liao; Michael H J Rhodin; Kelvin Lee; Jonathan D Dinman
Journal:  Nucleic Acids Res       Date:  2011-05-20       Impact factor: 16.971

6.  Chloramphenicol and tetracycline decrease motility and increase invasion and attachment gene expression in specific isolates of multidrug-resistant Salmonella enterica serovar Typhimurium.

Authors:  Brian W Brunelle; Bradley L Bearson; Shawn M D Bearson
Journal:  Front Microbiol       Date:  2015-01-30       Impact factor: 5.640

7.  Protein mistranslation protects bacteria against oxidative stress.

Authors:  Yongqiang Fan; Jiang Wu; Matthew H Ung; Nicholas De Lay; Chao Cheng; Jiqiang Ling
Journal:  Nucleic Acids Res       Date:  2015-01-10       Impact factor: 16.971

8.  Temperature dependent mistranslation in a hyperthermophile adapts proteins to lower temperatures.

Authors:  Michael H Schwartz; Tao Pan
Journal:  Nucleic Acids Res       Date:  2015-12-10       Impact factor: 16.971

9.  A dual fluorescent reporter for the investigation of methionine mistranslation in live cells.

Authors:  Ana Cristina Gomes; Anna J Kordala; Rita Strack; Xiaoyun Wang; Renaud Geslain; Kamila Delaney; Wesley C Clark; Robert Keenan; Tao Pan
Journal:  RNA       Date:  2016-01-04       Impact factor: 4.942

10.  Oxidation of cellular amino acid pools leads to cytotoxic mistranslation of the genetic code.

Authors:  Tammy J Bullwinkle; Noah M Reynolds; Medha Raina; Adil Moghal; Eleftheria Matsa; Andrei Rajkovic; Huseyin Kayadibi; Farbod Fazlollahi; Christopher Ryan; Nathaniel Howitz; Kym F Faull; Beth A Lazazzera; Michael Ibba
Journal:  Elife       Date:  2014-06-02       Impact factor: 8.140

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  1 in total

1.  Overshadow Effect of Psl on Bacterial Response to Physiochemically Distinct Surfaces Through Motility-Based Characterization.

Authors:  Chunhui Zhai; Wenchao Zhang; Jingchao Zhang; Luyan Z Ma; Kun Zhao
Journal:  Front Cell Infect Microbiol       Date:  2018-10-29       Impact factor: 5.293

  1 in total

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