Literature DB >> 26586187

Oscillatory stress stimulation uncovers an Achilles' heel of the yeast MAPK signaling network.

Amir Mitchell1, Ping Wei2, Wendell A Lim3.   

Abstract

Cells must interpret environmental information that often changes over time. In our experiment, we systematically monitored the growth of yeast cells under various frequencies of oscillating osmotic stress. Growth was severely inhibited at a particular resonance frequency, at which cells show hyperactivated transcriptional stress responses. This behavior represents a sensory misperception: The cells incorrectly interpret oscillations as a staircase of ever-increasing osmolarity. The misperception results from the capacity of the osmolarity-sensing mitogen-activated protein kinase (MAPK) network to retrigger with sequential osmotic stresses. Although this feature is critical for coping with natural challenges, such as continually increasing osmolarity, it results in a trade-off of fragility to non-natural oscillatory inputs that match the retriggering time. These findings demonstrate the value of non-natural dynamic perturbations in exposing hidden sensitivities of cellular regulatory networks.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 26586187      PMCID: PMC4721531          DOI: 10.1126/science.aab0892

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  17 in total

1.  Signal processing by the HOG MAP kinase pathway.

Authors:  Pascal Hersen; Megan N McClean; L Mahadevan; Sharad Ramanathan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-14       Impact factor: 11.205

2.  Combinatorial control required for the specificity of yeast MAPK signaling.

Authors:  H D Madhani; G R Fink
Journal:  Science       Date:  1997-02-28       Impact factor: 47.728

3.  Osmotic activation of the HOG MAPK pathway via Ste11p MAPKKK: scaffold role of Pbs2p MAPKK.

Authors:  F Posas; H Saito
Journal:  Science       Date:  1997-06-13       Impact factor: 47.728

4.  MAP kinases with distinct inhibitory functions impart signaling specificity during yeast differentiation.

Authors:  H D Madhani; C A Styles; G R Fink
Journal:  Cell       Date:  1997-11-28       Impact factor: 41.582

5.  A systems-level analysis of perfect adaptation in yeast osmoregulation.

Authors:  Dale Muzzey; Carlos A Gómez-Uribe; Jerome T Mettetal; Alexander van Oudenaarden
Journal:  Cell       Date:  2009-07-10       Impact factor: 41.582

6.  An osmosensing signal transduction pathway in yeast.

Authors:  J L Brewster; T de Valoir; N D Dwyer; E Winter; M C Gustin
Journal:  Science       Date:  1993-03-19       Impact factor: 47.728

7.  The Hog1 MAPK prevents cross talk between the HOG and pheromone response MAPK pathways in Saccharomyces cerevisiae.

Authors:  S M O'Rourke; I Herskowitz
Journal:  Genes Dev       Date:  1998-09-15       Impact factor: 11.361

8.  The Ste5 scaffold directs mating signaling by catalytically unlocking the Fus3 MAP kinase for activation.

Authors:  Matthew Good; Grace Tang; Julie Singleton; Attila Reményi; Wendell A Lim
Journal:  Cell       Date:  2009-03-20       Impact factor: 41.582

Review 9.  The Ste5p scaffold.

Authors:  E A Elion
Journal:  J Cell Sci       Date:  2001-11       Impact factor: 5.285

Review 10.  Scaffold proteins: hubs for controlling the flow of cellular information.

Authors:  Matthew C Good; Jesse G Zalatan; Wendell A Lim
Journal:  Science       Date:  2011-05-06       Impact factor: 47.728

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  37 in total

1.  A rate threshold mechanism regulates MAPK stress signaling and survival.

Authors:  Amanda N Johnson; Guoliang Li; Hossein Jashnsaz; Alexander Thiemicke; Benjamin K Kesler; Dustin C Rogers; Gregor Neuert
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-12       Impact factor: 11.205

2.  Distributed and dynamic intracellular organization of extracellular information.

Authors:  Alejandro A Granados; Julian M J Pietsch; Sarah A Cepeda-Humerez; Iseabail L Farquhar; Gašper Tkačik; Peter S Swain
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-21       Impact factor: 11.205

3.  Biophysical clocks face a trade-off between internal and external noise resistance.

Authors:  Weerapat Pittayakanchit; Zhiyue Lu; Justin Chew; Michael J Rust; Arvind Murugan
Journal:  Elife       Date:  2018-07-10       Impact factor: 8.140

Review 4.  New insights into mammalian signaling pathways using microfluidic pulsatile inputs and mathematical modeling.

Authors:  M Sumit; S Takayama; J J Linderman
Journal:  Integr Biol (Camb)       Date:  2017-01-23       Impact factor: 2.192

5.  Analysis of localized cAMP perturbations within a tissue reveal the effects of a local, dynamic gap junction state on ERK signaling.

Authors:  João Pedro Fonseca; Elham Aslankoohi; Andrew H Ng; Michael Chevalier
Journal:  PLoS Comput Biol       Date:  2022-03-30       Impact factor: 4.475

6.  Universal signal generator for dynamic cell stimulation.

Authors:  Andreas Piehler; Navid Ghorashian; Ce Zhang; Savaş Tay
Journal:  Lab Chip       Date:  2017-06-27       Impact factor: 6.799

7.  Tracing Information Flow from Erk to Target Gene Induction Reveals Mechanisms of Dynamic and Combinatorial Control.

Authors:  Maxwell Z Wilson; Pavithran T Ravindran; Wendell A Lim; Jared E Toettcher
Journal:  Mol Cell       Date:  2017-08-17       Impact factor: 17.970

Review 8.  Cellular perception and misperception: Internal models for decision-making shaped by evolutionary experience.

Authors:  Amir Mitchell; Wendell Lim
Journal:  Bioessays       Date:  2016-07-27       Impact factor: 4.345

Review 9.  Bacterial virulence mediated by orthogonal post-translational modification.

Authors:  Kaitlin A Chambers; Rebecca A Scheck
Journal:  Nat Chem Biol       Date:  2020-09-17       Impact factor: 15.040

10.  A predictive model of gene expression reveals the role of network motifs in the mating response of yeast.

Authors:  Amy E Pomeroy; Matthew I Peña; John R Houser; Gauri Dixit; Henrik G Dohlman; Timothy C Elston; Beverly Errede
Journal:  Sci Signal       Date:  2021-02-16       Impact factor: 8.192

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