Literature DB >> 18480263

Signal processing by the HOG MAP kinase pathway.

Pascal Hersen1, Megan N McClean, L Mahadevan, Sharad Ramanathan.   

Abstract

Signaling pathways relay information about changes in the external environment so that cells can respond appropriately. How much information a pathway can carry depends on its bandwidth. We designed a microfluidic device to reliably change the environment of single cells over a range of frequencies. Using this device, we measured the bandwidth of the Saccharomyces cerevisiae signaling pathway that responds to high osmolarity. This prototypical pathway, the HOG pathway, is shown to act as a low-pass filter, integrating the signal when it changes rapidly and following it faithfully when it changes more slowly. We study the dependence of the pathway's bandwidth on its architecture. We measure previously unknown bounds on all of the in vivo reaction rates acting in this pathway. We find that the two-component Ssk1 branch of this pathway is capable of fast signal integration, whereas the kinase Ste11 branch is not. Our experimental techniques can be applied to other signaling pathways, allowing the measurement of their in vivo kinetics and the quantification of their information capacity.

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Year:  2008        PMID: 18480263      PMCID: PMC2386076          DOI: 10.1073/pnas.0710770105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Osmostress-induced transcription by Hot1 depends on a Hog1-mediated recruitment of the RNA Pol II.

Authors:  Paula M Alepuz; Eulàlia de Nadal; Meritxell Zapater; Gustav Ammerer; Francesc Posas
Journal:  EMBO J       Date:  2003-05-15       Impact factor: 11.598

2.  A systems-biology analysis of feedback inhibition in the Sho1 osmotic-stress-response pathway.

Authors:  Nan Hao; Marcelo Behar; Stephen C Parnell; Matthew P Torres; Christoph H Borchers; Timothy C Elston; Henrik G Dohlman
Journal:  Curr Biol       Date:  2007-03-15       Impact factor: 10.834

3.  Activation of the yeast SSK2 MAP kinase kinase kinase by the SSK1 two-component response regulator.

Authors:  F Posas; H Saito
Journal:  EMBO J       Date:  1998-03-02       Impact factor: 11.598

4.  Osmotic activation of the HOG MAPK pathway via Ste11p MAPKKK: scaffold role of Pbs2p MAPKK.

Authors:  F Posas; H Saito
Journal:  Science       Date:  1997-06-13       Impact factor: 47.728

5.  Two protein tyrosine phosphatases, Ptp2 and Ptp3, modulate the subcellular localization of the Hog1 MAP kinase in yeast.

Authors:  C P Mattison; I M Ota
Journal:  Genes Dev       Date:  2000-05-15       Impact factor: 11.361

Review 6.  Osmotic stress signaling and osmoadaptation in yeasts.

Authors:  Stefan Hohmann
Journal:  Microbiol Mol Biol Rev       Date:  2002-06       Impact factor: 11.056

7.  Yeast HOG1 MAP kinase cascade is regulated by a multistep phosphorelay mechanism in the SLN1-YPD1-SSK1 "two-component" osmosensor.

Authors:  F Posas; S M Wurgler-Murphy; T Maeda; E A Witten; T C Thai; H Saito
Journal:  Cell       Date:  1996-09-20       Impact factor: 41.582

8.  Unique and redundant roles for HOG MAPK pathway components as revealed by whole-genome expression analysis.

Authors:  Sean M O'Rourke; Ira Herskowitz
Journal:  Mol Biol Cell       Date:  2003-10-31       Impact factor: 4.138

9.  Regulated nucleo/cytoplasmic exchange of HOG1 MAPK requires the importin beta homologs NMD5 and XPO1.

Authors:  P Ferrigno; F Posas; D Koepp; H Saito; P A Silver
Journal:  EMBO J       Date:  1998-10-01       Impact factor: 11.598

10.  Activation of yeast PBS2 MAPKK by MAPKKKs or by binding of an SH3-containing osmosensor.

Authors:  T Maeda; M Takekawa; H Saito
Journal:  Science       Date:  1995-07-28       Impact factor: 47.728

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  109 in total

Review 1.  Microfluidic technologies for temporal perturbations of chemotaxis.

Authors:  Daniel Irimia
Journal:  Annu Rev Biomed Eng       Date:  2010-08-15       Impact factor: 9.590

2.  Diverse sensitivity thresholds in dynamic signaling responses by social amoebae.

Authors:  C Joanne Wang; Adriel Bergmann; Benjamin Lin; Kyuri Kim; Andre Levchenko
Journal:  Sci Signal       Date:  2012-02-28       Impact factor: 8.192

3.  Information processing in the adaptation of Saccharomyces cerevisiae to osmotic stress: an analysis of the phosphorelay system.

Authors:  Friedemann Uschner; Edda Klipp
Journal:  Syst Synth Biol       Date:  2014-04-19

Review 4.  Signal Transduction at the Single-Cell Level: Approaches to Study the Dynamic Nature of Signaling Networks.

Authors:  L Naomi Handly; Jason Yao; Roy Wollman
Journal:  J Mol Biol       Date:  2016-07-16       Impact factor: 5.469

Review 5.  Oscillatory signaling processes: the how, the why and the where.

Authors:  Raymond Cheong; Andre Levchenko
Journal:  Curr Opin Genet Dev       Date:  2010-12       Impact factor: 5.578

6.  Dynamic analysis of MAPK signaling using a high-throughput microfluidic single-cell imaging platform.

Authors:  R J Taylor; D Falconnet; A Niemistö; S A Ramsey; S Prinz; I Shmulevich; T Galitski; C L Hansen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-17       Impact factor: 11.205

7.  Pulsing cells: how fast is too fast?

Authors:  Saurabh Paliwal; C Joanne Wang; Andre Levchenko
Journal:  HFSP J       Date:  2008-08-26

8.  Linear conversion of pressure into concentration, rapid switching of concentration, and generation of linear ramps of concentration in a microfluidic device.

Authors:  Micha Adler; Alex Groisman
Journal:  Biomicrofluidics       Date:  2012-04-13       Impact factor: 2.800

9.  Temporal quantification of MAPK induced expression in single yeast cells.

Authors:  Serge Pelet; Delphine Aymoz; Eric Durandau
Journal:  J Vis Exp       Date:  2013-10-04       Impact factor: 1.355

Review 10.  Adaptive molecular networks controlling chemotactic migration: dynamic inputs and selection of the network architecture.

Authors:  Hao Chang; Andre Levchenko
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-09-23       Impact factor: 6.237

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