| Literature DB >> 26569219 |
Jae Won Lee1, Seung-Heon Ji2, Geum-Soog Kim3, Kyung-Sik Song4, Yurry Um5, Ok Tae Kim6, Yi Lee7, Chang Pyo Hong8, Dong-Ho Shin9, Chang-Kug Kim10, Seung-Eun Lee11, Young-Sup Ahn12, Dae-Young Lee13.
Abstract
In this study, a method of metabolite profiling based on UPLC-QTOF/MS was developed to analyze Platycodon grandiflorum. In the optimal UPLC, various metabolites, including major platycosides, were separated well in 15 min. The metabolite extraction protocols were also optimized by selecting a solvent for use in the study, the ratio of solvent to sample and sonication time. This method was used to profile two different parts of P. grandiflorum, i.e., the roots of P. grandiflorum (PR) and the stems and leaves of P. grandiflorum (PS), in the positive and negative ion modes. As a result, PR and PS showed qualitatively and quantitatively different metabolite profiles. Furthermore, their metabolite compositions differed according to individual plant samples. These results indicate that the UPLC-QTOF/MS-based profiling method is a good tool to analyze various metabolites in P. grandiflorum. This metabolomics approach can also be applied to evaluate the overall quality of P. grandiflorum, as well as to discriminate the cultivars for the medicinal plant industry.Entities:
Keywords: Platycodon grandiflorum; UPLC-QTOF/MS; metabolomics
Mesh:
Substances:
Year: 2015 PMID: 26569219 PMCID: PMC4661852 DOI: 10.3390/ijms161125993
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
List of seven standards analyzed by UPLC-QTOF/MS. RT, retention time.
| No. | Standards | RT (min) | Molecular Formula | Expected Neutral Mass (Da) | Observed Neutral Mass (Da) | QTOF/MS (ESI-) | Mass Accuracy (ppm) | Adducts |
|---|---|---|---|---|---|---|---|---|
| 1 | Platycoside E | 4.01 | C69H112O38 | 1548.6832 | 1548.6783 | 1593.6765 | −3.08 | +HCOO |
| 2 | Platycodin D3 | 5.43 | C63H102O33 | 1386.6303 | 1386.6268 | 1431.625 | −2.44 | +HCOO |
| 3 | Platycodin D2 | 9.04 | C63H102O33 | 1386.6303 | 1386.6264 | 1385.6191 | −2.84 | -H |
| 4 | Platycodin D | 9.18 | C57H92O28 | 1224.5775 | 1224.5765 | 1269.5747 | −0.82 | +HCOO |
| 5 | Polygalacin D | 9.82 | C57H92O27 | 1208.5826 | 1208.5795 | 1253.5777 | −2.5 | +HCOO |
| 6 | Platycogenic acid A | 10.36 | C57H90O29 | 1238.5568 | 1238.5562 | 1237.5489 | −0.5 | -H |
| 7 | Platycodigenin | 13.85 | C30H48O7 | 520.34 | 520.3399 | 519.3326 | −0.21 | -H |
Figure 1UPLC-QTOF/MS, ESI- base peak intensity (BPI) chromatogram of (A) P. grandiflorum roots; (B) P. grandiflorum stems and leaves and (C) seven standards, including (1) platycoside E, (2) platycodin D3, (3) platycodin D2, (4) platycodin D, (5) polygalacin D, (6) platycogenic acid A and (7) platycodigenin.
The linearity range, correlation (R) and LOD of seven standards by UPLC-QTOF/MS.
| No. | Standards | Correlation ( | Linear Range (ng) | LOD (ng) |
|---|---|---|---|---|
| 1 | Platycoside E | 0.9939 | 1–40 | 1 |
| 2 | Platycodin D3 | 0.9975 | 1–100 | 1 |
| 3 | Platycodin D2 | 0.9976 | 1–100 | 1 |
| 4 | Platycodin D | 0.9898 | 1–40 | 1 |
| 5 | Polygalacin D | 0.9926 | 0.2–100 | 0.2 |
| 6 | Platycogenic acid A | 0.9957 | 1–100 | 1 |
| 7 | Platycodigenin | 0.9952 | 0.2–20 | 0.2 |
List of metabolites analyzed in P. grandiflorum root (ESI-).
| No. | RT (min) | Metabolites | Expected Neutral Mass (Da) | Observed Neutral Mass (Da) | QTOF/MS (ESI-) | Mass Accuracy (ppm) | Adducts | Intensity ( | ||
|---|---|---|---|---|---|---|---|---|---|---|
| PR-1 | PR-2 | PR-3 | ||||||||
| 1 | 0.55 | Glutamine | 146.0691 | 146.0688 | 145.0615 | −2.5 | -H | a 1837 ± 187 | - | - |
| 2 | 0.55 | Planteose | 504.169 | 504.169 | 549.1672 | 0 | +HCOO | 4903 ± 667 | - | 5636 ± 392 |
| 3 | 0.55 | α-Kojibiose | 342.1162 | 342.1161 | 387.1143 | −0.22 | -H | 1837 ± 958 | 16,344 ± 1310 | - |
| 4 | 0.6 | Maleic acid | 116.011 | 116.0113 | 115.004 | 2.98 | -H | - | 487 ± 66 | 483 ± 31 |
| 5 | 0.62 | 2-Hydroxyfuran-3-formic acid | 128.011 | 128.0104 | 173.0086 | −3.5 | +HCOO | 2305 ± 106 | 2025 ± 113 | 1752 ± 44 |
| 6 | 0.63 | 2-Furoic acid | 112.016 | 112.0163 | 111.009 | 1.99 | -H | 7646 ± 355 | 6875 ± 226 | 5943 ± 171 |
| 7 | 0.63 | Citric acid | 192.027 | 192.0264 | 191.0191 | −3.21 | -H | 41,368 ± 2527 | 37,122 ± 1795 | 32,419 ± 1422 |
| 8 | 2.11 | Arnebifuranone | 316.1311 | 316.1310 | 361.1292 | −0.19 | +HCOO | 661 ± 20 | 889 ± 28 | 656 ± 31 |
| 9 | 2.35 | Brusatol | 520.1945 | 520.1934 | 565.1917 | −1.8 | +HCOO | 4005 ± 351 | 2836 ± 266 | 5753 ± 492 |
| 10 | 3.8 | Platycoside G1 | 1416.6409 | 1416.6364 | 1461.6346 | −3.11 | +HCOO | 2456 ± 195 | 2457 ± 100 | 5734 ± 106 |
| 11 | 3.97 | Platycoside E | 1548.6832 | 1548.6788 | 1593.677 | −2.74 | +HCOO | 4451 ± 655 | 8863 ± 674 | 9183 ± 699 |
| 12 | 3.99 | Lobetyolin | 396.1784 | 396.1785 | 441.1767 | 0.19 | +HCOO | 13,407 ± 265 | 5473 ± 271 | 6794 ± 393 |
| 13 | 4.15 | Platycoside D | 1532.6882 | 1532.679 | 1577.6772 | −5.83 | +HCOO | - | 385 ± 47 | 500 ± 30 |
| 14 | 4.98 | Platycoside A | 1254.5881 | 1254.5849 | 1299.5831 | −2.48 | +HCOO | 13,802 ± 805 | 6425 ± 435 | 10,745 ± 864 |
| 15 | 5.31 | Platycodin D3 | 1386.6303 | 1386.6261 | 1431.6243 | −2.96 | +HCOO | 40,086 ± 4797 | 25,927 ± 2368 | 24,630 ± 2328 |
| 16 | 5.67 | Platycoside G2 | 1284.5986 | 1284.5937 | 1283.5865 | −3.82 | -H | 1626 ± 140 | 926 ± 103 | 1503 ± 149 |
| 17 | 8.24 | Deapioplatycodin D | 1092.5353 | 1092.5333 | 1137.5315 | −1.74 | +HCOO | 658 ± 47 | - | 443 ± 45 |
| 18 | 8.8 | Platycodin D2 | 1386.6303 | 1386.6231 | 1385.6159 | −5.2 | -H | 3130 ± 171 | 744 ± 44 | 1172 ± 103 |
| 19 | 8.93 | Platycodin D | 1224.5775 | 1224.5717 | 1269.5699 | −4.58 | +HCOO | a 4868 ± 606 | 1255 ± 67 | 1757 ± 161 |
| 20 | 9.35 | Platycodin A | 1266.5881 | 1266.5844 | 1311.5826 | −2.82 | +HCOO | 27,391 ± 2780 | 12,819 ± 889 | 24,750 ± 2250 |
a The values are the mean of intensities ±SD (n = 3).
List of metabolites analyzed in P. grandiflorum stems and leaves (ESI-).
| No. | RT (min) | Metabolites | Expected Neutral Mass (Da) | Observed Neutral Mass (Da) | QTOF/MS (ESI-) | Mass Accuracy (ppm) | Adducts | Intensity ( | ||
|---|---|---|---|---|---|---|---|---|---|---|
| PS-1 | PS-2 | PS-3 | ||||||||
| 1 | 0.51 | Arginine | 174.1117 | 174.1114 | 173.1041 | −1.65 | -H | a 477 ± 38 | 594 ± 37 | - |
| 2 | 0.55 | Aspartic acid | 133.0375 | 133.0374 | 132.0301 | −0.79 | -H | 405 ± 53 | - | - |
| 3 | 0.55 | Glutamic acid | 147.0532 | 147.0529 | 146.0456 | −1.59 | -H | 464 ± 47 | 506 ± 30 | - |
| 4 | 0.55 | Glutamine | 146.0691 | 146.0692 | 145.0619 | 0.14 | -H | 1306 ± 223 | 2516 ± 304 | - |
| 5 | 0.55 | Planteose | 504.169 | 504.1687 | 549.1669 | −0.57 | +HCOO | 619 ± 59 | - | - |
| 6 | 0.55 | Sodium ferulate | 216.0399 | 216.0391 | 215.0318 | −3.58 | -H | 996 ± 77 | - | 924 ± 36 |
| 7 | 0.55 | α-Kojibiose | 342.1162 | 342.1162 | 387.1144 | −0.03 | +HCOO | - | - | 10,644 ± 1655 |
| 8 | 0.56 | Ribose | 150.0528 | 150.0522 | 195.0504 | −3.26 | +HCOO | 1321 ± 83 | 1488 ± 103 | 1994 ± 138 |
| 9 | 0.6 | Maleic acid | 116.011 | 116.0113 | 115.004 | 2.99 | -H | 2127 ± 103 | 2421 ± 125 | 1743 ± 58 |
| 10 | 0.61 | 5-Oxoproline | 129.0426 | 129.0427 | 128.0354 | 0.88 | -H | - | 643 ± 49 | - |
| 11 | 0.61 | Pyruvic acid | 88.016 | 88.0161 | 133.0143 | 0.3 | +HCOO | 10,969 ± 482 | 11,961 ± 423 | 8726 ± 469 |
| 12 | 0.62 | 2-Furoic acid | 112.016 | 112.0164 | 111.0091 | 3.1 | -H | 4606 ± 239 | 5134 ± 222 | 3194 ± 252 |
| 13 | 0.62 | 2-Hydroxyfuran-3-formic acid | 128.011 | 128.0106 | 173.0088 | −2.23 | +HCOO | a 1611 ± 92 | 1806 ± 111 | 1397 ± 60 |
| 14 | 0.62 | Citric acid | 192.027 | 192.0263 | 191.019 | −3.61 | -H | 26,784 ± 677 | 30,360 ± 1294 | 18,681 ± 375 |
| 15 | 0.77 | 6,7-Dihydroxycoumarin | 178.0266 | 178.0261 | 223.0243 | −2.23 | +HCOO | 1090 ± 83 | 677 ± 33 | 513 ± 27 |
| 16 | 0.8 | 1- | 354.0951 | 354.0951 | 353.0878 | 0.05 | -H | - | - | 4272 ± 498 |
| 17 | 1 | Decaffeoylacteoside | 462.1737 | 462.1741 | 461.1669 | 0.91 | -H | 339 ± 46 | 494 ± 50 | 329 ± 33 |
| 18 | 1.01 | Tryptophan | 204.0899 | 204.0899 | 203.0826 | −0.01 | -H | 813 ± 83 | 974 ± 106 | 566 ± 34 |
| 19 | 1.06 | Quinic acid | 192.0634 | 192.063 | 191.0557 | −2.21 | -H | 26,641 ± 1875 | 27,777 ± 2173 | 31,286 ± 1747 |
| 20 | 1.07 | 4- | 354.0951 | 354.0951 | 353.0878 | −0.08 | -H | - | - | 83,405 ± 3981 |
| 21 | 1.1 | Shikimic acid | 174.0528 | 174.0527 | 173.0454 | −0.78 | -H | 591 ± 50 | 624 ± 77 | 811 ± 90 |
| 22 | 1.15 | 1,5-Dihydrxy-2,3,4,7-tetramethoxyxanthone | 348.0845 | 348.0838 | 393.082 | −1.77 | +HCOO | 354 ± 20 | - | 329 ± 25 |
| 23 | 1.15 | 4- | 326.1002 | 326.1002 | 325.0929 | 0.08 | -H | 1445 ± 147 | - | 1392 ± 86 |
| 24 | 1.21 | Genistein-7,4'-di- | 594.1585 | 594.1583 | 593.151 | −0.32 | -H | - | 1280 ± 176 | - |
| 25 | 1.26 | 1- | 342.0951 | 342.095 | 341.0878 | −0.14 | -H | 2243 ± 143 | 2603 ± 289 | 2525 ± 148 |
| 26 | 1.35 | 164.0473 | 164.0472 | 163.04 | −0.6 | -H | 670 ± 118 | 859 ± 177 | 962 ± 102 | |
| 27 | 1.38 | Chlorogenic acid | 354.0951 | 354.095 | 353.0877 | −0.27 | -H | 12,530 ± 967 | 14,301 ± 1076 | 14,725 ± 798 |
| 28 | 1.91 | 3- | 338.1002 | 338.1001 | 337.0928 | −0.24 | -H | 3879 ± 282 | 6685 ± 483 | 3502 ± 257 |
| 29 | 2.04 | 9-Hydroxylinalool-9-β- | 332.1835 | 332.1834 | 377.1816 | −0.35 | +HCOO | 680 ± 116 | 431 ± 77 | 868 ± 111 |
| 30 | 2.11 | Arnebifuranone | 316.1311 | 316.131 | 361.1292 | −0.1 | +HCOO | - | 373 ± 32 | - |
| 31 | 2.24 | Kaempferol-3- | 594.1585 | 594.1581 | 593.1508 | −0.69 | -H | - | - | a 1578 ± 158 |
| 32 | 2.37 | Brusatol | 520.1945 | 520.1944 | 565.1926 | −0.08 | +HCOO | - | 6136 ± 483 | 4755 ± 461 |
| 33 | 2.4 | Kaempferol-3-gentiobioside | 610.1534 | 610.1523 | 609.145 | −1.86 | -H | - | 1030 ± 284 | - |
| 34 | 2.49 | Kaempferol | 286.0477 | 286.0467 | 285.0394 | −3.62 | -H | - | - | 4400 ± 366 |
| 35 | 2.5 | Quercetin-3- | 492.0904 | 492.0907 | 491.0834 | 0.58 | -H | 1028 ± 88 | 900 ± 100 | - |
| 36 | 2.53 | Taraxacolide 1-glucopyranoside | 430.2203 | 430.2204 | 475.2186 | 0.3 | +HCOO | 3078 ± 242 | 4529 ± 519 | 3659 ± 430 |
| 37 | 3 | 1,5- | 516.1268 | 516.1269 | 515.1196 | 0.25 | -H | - | - | 510 ± 31 |
| 38 | 3.27 | 3'-Hydroxypuerarin | 448.1006 | 448.1009 | 447.0936 | 0.75 | -H | 1894 ± 208 | 2107 ± 231 | 2228 ± 243 |
| 39 | 3.27 | Eriodictyol-7- | 478.1111 | 478.111 | 477.1038 | −0.19 | -H | - | 750 ± 67 | 975 ± 61 |
| 40 | 3.37 | Luteolin 7- | 490.1111 | 490.1112 | 489.1039 | 0.13 | -H | 790 ± 58 | 21,846 ± 1788 | 7148 ± 472 |
| 41 | 3.37 | Quercetin-3- | 506.106 | 506.107 | 505.0997 | 1.91 | -H | - | 369 ± 34 | 763 ± 116 |
| 42 | 3.38 | Epicatechin-3- | 442.09 | 442.0907 | 487.0889 | 1.49 | +HCOO | - | 3838 ± 400 | 1207 ± 95 |
| 43 | 3.58 | 5- | 410.1577 | 410.1579 | 409.1506 | 0.5 | -H | 328 ± 28 | 516 ± 96 | 361 ± 21 |
| 44 | 3.62 | Kaempferol-3- | 490.1111 | 490.1122 | 489.1049 | 2.14 | -H | 74,782 ± 6202 | - | - |
| 45 | 3.99 | Methyl-β- | 180.0634 | 180.0632 | 179.0559 | −0.9 | -H | 1944 ± 224 | 2168 ± 222 | - |
| 46 | 4.98 | Platycoside A | 1254.588 | 1254.585 | 1299.583 | −2.28 | +HCOO | 417 ± 48 | 815 ± 147 | 1088 ± 108 |
| 47 | 5.11 | 5,7,3′,5′-Tetrahydroxyflavanone | 288.0634 | 288.0629 | 287.0556 | −1.81 | -H | 3719 ± 239 | 2445 ± 142 | - |
| 48 | 5.24 | Epigallocatechin | 594.1373 | 594.137 | 593.1298 | −0.49 | -H | - | - | 581 ± 78 |
| 49 | 5.31 | Platycodin D3 | 1386.63 | 1386.625 | 1431.623 | −3.83 | +HCOO | a 1582 ± 209 | 3569 ± 375 | 3396 ± 291 |
| 50 | 5.35 | 5,7,2',5'-Tetrahydroxy-flavone | 286.0477 | 286.0473 | 285.04 | −1.48 | -H | 152,282 ± 7073 | 146,318 ± 5227 | 136,503 ± 4826 |
| 51 | 5.36 | 5,7,8,3′,4′-Pentamethoxy flavones | 302.0427 | 302.0424 | 301.0352 | −0.71 | -H | 542 ± 63 | 558 ± 76 | 515 ± 45 |
| 52 | 6.27 | Apigenin-7- | 474.1162 | 474.1166 | 473.1093 | 0.79 | -H | 2009 ± 109 | 1265 ± 145 | - |
| 53 | 7.83 | Apigenol | 270.0528 | 270.0522 | 269.0449 | −2.32 | -H | 43,135 ± 2315 | 59,953 ± 3044 | 38,068 ± 1691 |
| 54 | 8.8 | Platycodin D2 | 1386.63 | 1386.626 | 1385.618 | −3.45 | -H | 849 ± 156 | 792 ± 113 | 1307 ±205 |
| 55 | 8.94 | Platycodin D | 1224.578 | 1224.574 | 1269.572 | −2.86 | +HCOO | 613 ± 88 | 763 ± 87 | 1416 ± 190 |
| 56 | 9.37 | Platycodin A | 1266.588 | 1266.584 | 1311.583 | −2.91 | +HCOO | 8564 ± 832 | 8149 ± 769 | 21,255 ± 1202 |
a The values are the mean of intensities ±SD (n = 3).
Figure 2Venn diagram of metabolites analyzed in three P. grandiflorum roots (PRs) and three P. grandiflorum stems and leaves (PSs) (ESI-).
Figure 3Bar graph of several platycosides in three PRs (A) and three PSs (B).