Literature DB >> 26539452

"Liquid biopsy"-ctDNA detection with great potential and challenges.

Mingwei Ma1, Hongcheng Zhu1, Chi Zhang1, Xinchen Sun1, Xianshu Gao1, Gang Chen1.   

Abstract

Circulating tumor DNA (ctDNA) is now being extensively studied as it is a noninvasive "real-time" biomarker that can provide diagnostic and prognostic information before, during treatment and at progression. These include DNA mutations, epigenetic alterations and other forms of tumor-specific abnormalities such as microsatellite instability (MSI) and loss of heterozygosity (LOH). ctDNA is of great value in the process of cancer treatment. However, up to date, there is no strict standard considering the exact biomarker because the development and progression of cancer is extremely complicated. Also, results of the studies evaluating ctDNA are not consistent due to the different detection methods and processing. The major challenge is still assay sensitivity and specificity for analysis of ctDNA. This review mainly focuses on the tumor specific DNA mutations, epigenetic alterations as well as detecting methods of ctDNA. The advantages and disadvantages will also be discussed.

Entities:  

Keywords:  Circulating tumor DNA (ctDNA); DNA methylation; DNA mutation; biomarker; cancer

Year:  2015        PMID: 26539452      PMCID: PMC4598453          DOI: 10.3978/j.issn.2305-5839.2015.09.29

Source DB:  PubMed          Journal:  Ann Transl Med        ISSN: 2305-5839


  58 in total

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Journal:  Life Sci       Date:  2010-05-12       Impact factor: 5.037

Review 2.  Do circulating tumor cells, exosomes, and circulating tumor nucleic acids have clinical utility? A report of the association for molecular pathology.

Authors:  Bert Gold; Milena Cankovic; Larissa V Furtado; Frederick Meier; Christopher D Gocke
Journal:  J Mol Diagn       Date:  2015-05       Impact factor: 5.568

3.  K-ras mutations in DNA extracted from the plasma of patients with pancreatic carcinoma: diagnostic utility and prognostic significance.

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Journal:  J Clin Oncol       Date:  1999-02       Impact factor: 44.544

Review 4.  TP53 mutations in human cancers: origins, consequences, and clinical use.

Authors:  Magali Olivier; Monica Hollstein; Pierre Hainaut
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-01       Impact factor: 10.005

5.  The influence of methylated septin 9 gene on RNA and protein level in colorectal cancer.

Authors:  Kinga Tóth; Orsolya Galamb; Sándor Spisák; Barnabás Wichmann; Ferenc Sipos; Gábor Valcz; Katalin Leiszter; Béla Molnár; Zsolt Tulassay
Journal:  Pathol Oncol Res       Date:  2011-01-26       Impact factor: 3.201

6.  [Microsatellite alterations of circulating DNA in the plasma of patients with hepatocellular carcinoma].

Authors:  Jin-zhong Pang; Lun-xiu Qin; Ning Ren; Qing-hai Ye; Wei-dong Ying; Yin-kun Liu; Zhao-you Tang
Journal:  Zhonghua Yi Xue Za Zhi       Date:  2006-06-27

7.  Novel genetic markers of breast cancer survival identified by a genome-wide association study.

Authors:  Xiao Ou Shu; Jirong Long; Wei Lu; Chun Li; Wendy Y Chen; Ryan Delahanty; Jiarong Cheng; Hui Cai; Ying Zheng; Jiajun Shi; Kai Gu; Wen-Jing Wang; Peter Kraft; Yu-Tang Gao; Qiuyin Cai; Wei Zheng
Journal:  Cancer Res       Date:  2012-01-09       Impact factor: 12.701

8.  Serum DNA can define tumor-specific genetic and epigenetic markers in gliomas of various grades.

Authors:  Iris Lavon; Miri Refael; Bracha Zelikovitch; Edna Shalom; Tali Siegal
Journal:  Neuro Oncol       Date:  2010-02-01       Impact factor: 12.300

9.  Soluble normal and mutated DNA sequences from single-copy genes in human blood.

Authors:  G D Sorenson; D M Pribish; F H Valone; V A Memoli; D J Bzik; S L Yao
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  1994 Jan-Feb       Impact factor: 4.254

10.  Tumor-associated copy number changes in the circulation of patients with prostate cancer identified through whole-genome sequencing.

Authors:  Ellen Heitzer; Peter Ulz; Jelena Belic; Stefan Gutschi; Franz Quehenberger; Katja Fischereder; Theresa Benezeder; Martina Auer; Carina Pischler; Sebastian Mannweiler; Martin Pichler; Florian Eisner; Martin Haeusler; Sabine Riethdorf; Klaus Pantel; Hellmut Samonigg; Gerald Hoefler; Herbert Augustin; Jochen B Geigl; Michael R Speicher
Journal:  Genome Med       Date:  2013-04-05       Impact factor: 15.266

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  44 in total

Review 1.  Circulating Tumor Cells: State-of-the-art Update on Technologies and Clinical Applications.

Authors:  Kristofor Yap; Evan N Cohen; James M Reuben; Joseph D Khoury
Journal:  Curr Hematol Malig Rep       Date:  2019-10       Impact factor: 3.952

2.  Targeted drugs for unselected patients with advanced non-small-cell lung cancer: a network meta-analysis.

Authors:  Miaomiao Sheng; Yueguang Zhao; Fang Wang; Shanshan Li; Xiaojie Wang; Tao Shou; Ying Luo; Wenru Tang
Journal:  J Thorac Dis       Date:  2016-01       Impact factor: 2.895

Review 3.  Noninvasive prenatal testing for aneuploidy using cell-free DNA - New implications for maternal health.

Authors:  Lisa Hui
Journal:  Obstet Med       Date:  2016-06-07

Review 4.  The Role of BEAMing and Digital PCR for Multiplexed Analysis in Molecular Oncology in the Era of Next-Generation Sequencing.

Authors:  Jérôme Alexandre Denis; Erell Guillerm; Florence Coulet; Annette K Larsen; Jean-Marc Lacorte
Journal:  Mol Diagn Ther       Date:  2017-12       Impact factor: 4.074

Review 5.  The promise of circulating tumor cells for precision cancer therapy.

Authors:  William L Hwang; Katie L Hwang; David T Miyamoto
Journal:  Biomark Med       Date:  2016-12-07       Impact factor: 2.851

Review 6.  Engineered Niches to Analyze Mechanisms of Metastasis and Guide Precision Medicine.

Authors:  Aaron H Morris; Sophia M Orbach; Grace G Bushnell; Robert S Oakes; Jacqueline S Jeruss; Lonnie D Shea
Journal:  Cancer Res       Date:  2020-05-14       Impact factor: 12.701

7.  The signature of pharmaceutical sensitivity based on ctDNA mutation in eleven cancers.

Authors:  Shumei Zhang; Mu Su; Zhongyi Sun; Haibo Lu; Yan Zhang
Journal:  Exp Biol Med (Maywood)       Date:  2020-02-12

Review 8.  Nodular Thyroid Disease and Thyroid Cancer in the Era of Precision Medicine.

Authors:  Carles Zafon; Juan J Díez; Juan C Galofré; David S Cooper
Journal:  Eur Thyroid J       Date:  2017-03-03

9.  The diagnostic and prognostic usage of circulating tumor DNA in operable hepatocellular carcinoma.

Authors:  Yan An; Yanfang Guan; Yaping Xu; Yingxin Han; Chi Wu; Chaohui Bao; Boping Zhou; Haiyan Wang; Mingxia Zhang; Weilong Liu; Lin Qiu; Zeguang Han; Yongsheng Chen; Xuefeng Xia; Jiayin Wang; Zhentian Liu; Wanqiu Huang; Xin Yi; Jian Huang
Journal:  Am J Transl Res       Date:  2019-10-15       Impact factor: 4.060

Review 10.  Advances in liquid biopsy on-chip for cancer management: Technologies, biomarkers, and clinical analysis.

Authors:  Amogha Tadimety; Andrew Closson; Cathy Li; Song Yi; Ting Shen; John X J Zhang
Journal:  Crit Rev Clin Lab Sci       Date:  2018-02-01       Impact factor: 6.250

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