Literature DB >> 29388456

Advances in liquid biopsy on-chip for cancer management: Technologies, biomarkers, and clinical analysis.

Amogha Tadimety1, Andrew Closson1, Cathy Li1, Song Yi2, Ting Shen2, John X J Zhang1,3.   

Abstract

Liquid biopsy, as a minimally invasive method of gleaning insight into the dynamics of diseases through a patient fluid sample, has been growing in popularity for cancer diagnosis, prognosis, and monitoring. While many technologies have been developed and validated in research laboratories, there has also been a push to expand these technologies into other clinical settings and as point of care devices. In this article, we discuss and evaluate microchip-based technologies for circulating tumor cell (CTC), exosome, and circulating tumor nucleic acid (ctNA) capture, detection, and analysis. Such integrated systems streamline otherwise multiple-step, manual operations to get a sample-to-answer quantitation. In addition, analysis of disease biomarkers is suited to point of care settings because of ease of use, low consumption of sample and reagents, and high throughput. We also cover the basics of biomarkers and their detection in biological fluid samples suitable for liquid biopsy on-chip. We focus on emerging technologies that process a small patient sample with high spatial-temporal resolution and derive clinically meaningful results through on-chip biomarker sensing and downstream molecular analysis in a simple workflow. This critical review is meant as a resource for those interested in developing technologies for capture, detection, and analysis platforms for liquid biopsy in a variety of settings.

Entities:  

Keywords:  Liquid biopsy; cancer biomarker; biosensor; lab-on-chip; point of care

Mesh:

Substances:

Year:  2018        PMID: 29388456      PMCID: PMC6101655          DOI: 10.1080/10408363.2018.1425976

Source DB:  PubMed          Journal:  Crit Rev Clin Lab Sci        ISSN: 1040-8363            Impact factor:   6.250


  105 in total

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Journal:  Chem Rev       Date:  2008-01-30       Impact factor: 60.622

2.  Circulating nucleic acids in plasma and serum. Recent developments.

Authors:  Peter B Gahan; R Swaminathan
Journal:  Ann N Y Acad Sci       Date:  2008-08       Impact factor: 5.691

Review 3.  Nucleic acid sample preparation for in vitro molecular diagnosis: from conventional techniques to biotechnology.

Authors:  Md Mahbubor Rahman; Abdelhamid Elaissari
Journal:  Drug Discov Today       Date:  2012-07-20       Impact factor: 7.851

4.  Methods for the extraction and RNA profiling of exosomes.

Authors:  Emily Zeringer; Mu Li; Tim Barta; Jeoffrey Schageman; Ketil Winther Pedersen; Axl Neurauter; Susan Magdaleno; Robert Setterquist; Alexander V Vlassov
Journal:  World J Methodol       Date:  2013-03-26

5.  Ciliated micropillars for the microfluidic-based isolation of nanoscale lipid vesicles.

Authors:  Zongxing Wang; Hung-jen Wu; Daniel Fine; Jeffrey Schmulen; Ye Hu; Biana Godin; John X J Zhang; Xuewu Liu
Journal:  Lab Chip       Date:  2013-08-07       Impact factor: 6.799

6.  Cancer Statistics, 2017.

Authors:  Rebecca L Siegel; Kimberly D Miller; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2017-01-05       Impact factor: 508.702

Review 7.  Point-of-care biosensor systems for cancer diagnostics/prognostics.

Authors:  Steven A Soper; Kathlynn Brown; Andrew Ellington; Bruno Frazier; Guillermo Garcia-Manero; Vincent Gau; Steven I Gutman; Daniel F Hayes; Brenda Korte; James L Landers; Dale Larson; Frances Ligler; Arun Majumdar; Marco Mascini; David Nolte; Zeev Rosenzweig; Joseph Wang; David Wilson
Journal:  Biosens Bioelectron       Date:  2006-02-13       Impact factor: 10.618

Review 8.  Implementing liquid biopsies into clinical decision making for cancer immunotherapy.

Authors:  Dagmar Quandt; Hans Dieter Zucht; Arno Amann; Anne Wulf-Goldenberg; Carl Borrebaeck; Michael Cannarile; Diether Lambrechts; Herbert Oberacher; James Garrett; Tapan Nayak; Michael Kazinski; Charles Massie; Heidi Schwarzenbach; Michele Maio; Robert Prins; Björn Wendik; Richard Hockett; Daniel Enderle; Mikkel Noerholm; Hans Hendriks; Heinz Zwierzina; Barbara Seliger
Journal:  Oncotarget       Date:  2017-07-18

9.  Glioblastoma microvesicles transport RNA and proteins that promote tumour growth and provide diagnostic biomarkers.

Authors:  Johan Skog; Tom Würdinger; Sjoerd van Rijn; Dimphna H Meijer; Laura Gainche; Miguel Sena-Esteves; William T Curry; Bob S Carter; Anna M Krichevsky; Xandra O Breakefield
Journal:  Nat Cell Biol       Date:  2008-11-16       Impact factor: 28.824

Review 10.  Guidance for laboratories performing molecular pathology for cancer patients.

Authors:  Ian A Cree; Zandra Deans; Marjolijn J L Ligtenberg; Nicola Normanno; Anders Edsjö; Etienne Rouleau; Francesc Solé; Erik Thunnissen; Wim Timens; Ed Schuuring; Elisabeth Dequeker; Samuel Murray; Manfred Dietel; Patricia Groenen; J Han Van Krieken
Journal:  J Clin Pathol       Date:  2014-07-10       Impact factor: 3.411

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  16 in total

1.  Effect of electrode configuration on the sensitivity of nucleic acid detection in a non-planar, flow-through, porous interdigitated electrode.

Authors:  Yu-Hsuan Cheng; Pedro Antonio Reis Moura; Li Zhenglong; Lixin Feng; Siril Arokiam; Juliana Yang; Mahima Hariharan; Sagnik Basuray
Journal:  Biomicrofluidics       Date:  2019-11-21       Impact factor: 2.800

2.  Identification of Metastasis-Associated Genes in Cutaneous Squamous Cell Carcinoma Based on Bioinformatics Analysis and Experimental Validation.

Authors:  Lang Chen; Xuan Liao; Xiao Jiang; Jianxin Yan; Jiaji Liang; Liu Hongwei
Journal:  Adv Ther       Date:  2022-08-10       Impact factor: 4.070

Review 3.  Current Status, Opportunities, and Challenges of Exosomes in Oral Cancer Diagnosis and Treatment.

Authors:  Hongyu Liu; Yisheng Huang; Mingshu Huang; Zhijie Huang; Qin Wang; Ling Qing; Li Li; Shuaimei Xu; Bo Jia
Journal:  Int J Nanomedicine       Date:  2022-06-16

Review 4.  Systematic Review of Epigenetic Therapies for Treatment of IDH-mutant Glioma.

Authors:  Vaidya Govindarajan; Ashish H Shah; Long Di; Sarah Rivas; Robert K Suter; Daniel G Eichberg; Evan Luther; Victor Lu; Alexis A Morell; Michael E Ivan; Ricardo J Komotar; Nagi Ayad; Macarena De La Fuente
Journal:  World Neurosurg       Date:  2022-03-18       Impact factor: 2.210

Review 5.  Scalable Signature-Based Molecular Diagnostics Through On-chip Biomarker Profiling Coupled with Machine Learning.

Authors:  John Molinski; Amogha Tadimety; Alison Burklund; John X J Zhang
Journal:  Ann Biomed Eng       Date:  2020-08-20       Impact factor: 3.934

6.  Microfluidics-enabled rapid manufacturing of hierarchical silica-magnetic microflower toward enhanced circulating tumor cell screening.

Authors:  Nanjing Hao; Yuan Nie; Amogha Tadimety; Ting Shen; John X J Zhang
Journal:  Biomater Sci       Date:  2018-11-20       Impact factor: 6.843

Review 7.  Liquid Biopsy in Colorectal Cancer-Current Status and Potential Clinical Applications.

Authors:  Gregor Norcic
Journal:  Micromachines (Basel)       Date:  2018-06-15       Impact factor: 2.891

Review 8.  Updates on Clinical Use of Liquid Biopsy in Colorectal Cancer Screening, Diagnosis, Follow-Up, and Treatment Guidance.

Authors:  Omayma Mazouji; Abdelhak Ouhajjou; Roberto Incitti; Hicham Mansour
Journal:  Front Cell Dev Biol       Date:  2021-05-24

Review 9.  Blood-Based Cancer Biomarkers in Liquid Biopsy: A Promising Non-Invasive Alternative to Tissue Biopsy.

Authors:  José Marrugo-Ramírez; Mònica Mir; Josep Samitier
Journal:  Int J Mol Sci       Date:  2018-09-21       Impact factor: 5.923

Review 10.  Electrochemical Detection and Point-of-Care Testing for Circulating Tumor Cells: Current Techniques and Future Potentials.

Authors:  Chunyang Lu; Jintao Han; Xiaoyi Sun; Gen Yang
Journal:  Sensors (Basel)       Date:  2020-10-26       Impact factor: 3.576

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