Literature DB >> 26481664

Anionic Phospholipids Stabilize RecA Filament Bundles in Escherichia coli.

Manohary Rajendram1, Leili Zhang2, Bradley J Reynolds1, George K Auer3, Hannah H Tuson1, Khanh V Ngo1, Michael M Cox1, Arun Yethiraj2, Qiang Cui2, Douglas B Weibel4.   

Abstract

We characterize the interaction of RecA with membranes in vivo and in vitro and demonstrate that RecA binds tightly to the anionic phospholipids cardiolipin (CL) and phosphatidylglycerol (PG). Using computational models, we identify two regions of RecA that interact with PG and CL: (1) the N-terminal helix and (2) loop L2. Mutating these regions decreased the affinity of RecA to PG and CL in vitro. Using 3D super-resolution microscopy, we demonstrate that depleting Escherichia coli PG and CL altered the localization of RecA foci and hindered the formation of RecA filament bundles. Consequently, E. coli cells lacking aPLs fail to initiate a robust SOS response after DNA damage, indicating that the membrane acts as a scaffold for nucleating the formation of RecA filament bundles and plays an important role in the SOS response.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26481664      PMCID: PMC4771187          DOI: 10.1016/j.molcel.2015.09.009

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  32 in total

1.  Requirements for ATP binding and hydrolysis in RecA function in Escherichia coli.

Authors:  Nicholas Renzette; Steven J Sandler
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2.  Mutant RecA proteins which form hexamer-sized oligomers.

Authors:  K M Logan; M C Skiba; S Eldin; K L Knight
Journal:  J Mol Biol       Date:  1997-02-21       Impact factor: 5.469

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Authors:  X Yu; E H Egelman
Journal:  J Mol Biol       Date:  1992-05-05       Impact factor: 5.469

4.  Structure of helical RecA-DNA complexes. II. Local conformational changes visualized in bundles of RecA-ATP gamma S filaments.

Authors:  E H Egelman; A Stasiak
Journal:  J Mol Biol       Date:  1988-03-20       Impact factor: 5.469

5.  Evidence for RecA protein association with the cell membrane and for changes in the levels of major outer membrane proteins in SOS-induced Escherichia coli cells.

Authors:  N Garvey; A C St John; E M Witkin
Journal:  J Bacteriol       Date:  1985-09       Impact factor: 3.490

6.  Evolutionary conservation of RecA genes in relation to protein structure and function.

Authors:  S Karlin; L Brocchieri
Journal:  J Bacteriol       Date:  1996-04       Impact factor: 3.490

7.  Generalized born model with a simple smoothing function.

Authors:  Wonpil Im; Michael S Lee; Charles L Brooks
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8.  Interaction of recA protein with single-stranded DNA. Quantitative aspects of binding affinity modulation by nucleotide cofactors.

Authors:  J P Menetski; S C Kowalczykowski
Journal:  J Mol Biol       Date:  1985-01-20       Impact factor: 5.469

9.  DNA-induced aggregation and fusion of phosphatidylcholine liposomes in the presence of multivalent cations observed by the cryo-TEM technique.

Authors:  Vasily V Kuvichkin; Radostin S Danev; Hideki Shigematsu; Kuniaki Nagayama
Journal:  J Membr Biol       Date:  2009-01-03       Impact factor: 1.843

10.  Free Energy Calculations for the Peripheral Binding of Proteins/Peptides to an Anionic Membrane. 1. Implicit Membrane Models.

Authors:  Leili Zhang; Arun Yethiraj; Qiang Cui
Journal:  J Chem Theory Comput       Date:  2014-07-08       Impact factor: 6.006

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  20 in total

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Journal:  Elife       Date:  2019-02-05       Impact factor: 8.140

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Authors:  Daisuke Shiomi
Journal:  Curr Genet       Date:  2017-04-24       Impact factor: 3.886

Review 3.  DNA Sequence Alignment during Homologous Recombination.

Authors:  Eric C Greene
Journal:  J Biol Chem       Date:  2016-04-15       Impact factor: 5.157

Review 4.  Insights into the complex levels of regulation imposed on Escherichia coli DNA polymerase V.

Authors:  Myron F Goodman; John P McDonald; Malgorzata M Jaszczur; Roger Woodgate
Journal:  DNA Repair (Amst)       Date:  2016-05-13

Review 5.  Bacterial Vivisection: How Fluorescence-Based Imaging Techniques Shed a Light on the Inner Workings of Bacteria.

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Journal:  Microbiol Mol Biol Rev       Date:  2020-10-28       Impact factor: 11.056

6.  Hypothesis: nucleoid-associated proteins segregate with a parental DNA strand to generate coherent phenotypic diversity.

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7.  Mycobacterial Mutagenesis and Drug Resistance Are Controlled by Phosphorylation- and Cardiolipin-Mediated Inhibition of the RecA Coprotease.

Authors:  Matthew F Wipperman; Brook E Heaton; Astha Nautiyal; Oyindamola Adefisayo; Henry Evans; Richa Gupta; Dave van Ditmarsch; Rajesh Soni; Ron Hendrickson; Jeff Johnson; Nevan Krogan; Michael S Glickman
Journal:  Mol Cell       Date:  2018-08-30       Impact factor: 17.970

Review 8.  Optical and force nanoscopy in microbiology.

Authors:  Jie Xiao; Yves F Dufrêne
Journal:  Nat Microbiol       Date:  2016-10-26       Impact factor: 17.745

9.  Genome-Wide Functional Screen for Calcium Transients in Escherichia coli Identifies Increased Membrane Potential Adaptation to Persistent DNA Damage.

Authors:  Rose Luder; Giancarlo N Bruni; Joel M Kralj
Journal:  J Bacteriol       Date:  2021-01-11       Impact factor: 3.490

10.  Evidence that bacteriophage λ lysogens may induce in response to the proton motive force uncoupler CCCP.

Authors:  Lynn C Thomason; Donald L Court
Journal:  FEMS Microbiol Lett       Date:  2015-12-23       Impact factor: 2.742

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