Literature DB >> 33095418

Hypothesis: nucleoid-associated proteins segregate with a parental DNA strand to generate coherent phenotypic diversity.

Yoan Konto-Ghiorghi1, Vic Norris2.   

Abstract

The generation of a phenotypic diversity that is coherent across a bacterial population is a fundamental problem. We propose here that the DNA strand-specific segregation of certain nucleoid-associated proteins or NAPs results in these proteins being asymmetrically distributed to the daughter cells. We invoke a variety of mechanisms as responsible for this asymmetrical segregation including those based on differences between the leading and lagging strands, post-translational modifications, oligomerisation and association with membrane domains.

Keywords:  Assembly; Bacteria; Cell cycle; DNA strand; Heterogeneity; Hyperstructure

Year:  2020        PMID: 33095418     DOI: 10.1007/s12064-020-00323-5

Source DB:  PubMed          Journal:  Theory Biosci        ISSN: 1431-7613            Impact factor:   1.919


  77 in total

1.  The bacterial histone-like protein HU specifically recognizes similar structures in all nucleic acids. DNA, RNA, and their hybrids.

Authors:  Anna Balandina; Dmitri Kamashev; Josette Rouviere-Yaniv
Journal:  J Biol Chem       Date:  2002-05-10       Impact factor: 5.157

Review 2.  Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression.

Authors:  Douglas F Browning; David C Grainger; Stephen Jw Busby
Journal:  Curr Opin Microbiol       Date:  2010-10-13       Impact factor: 7.934

3.  H-NS forms a superhelical protein scaffold for DNA condensation.

Authors:  Stefan T Arold; Paul G Leonard; Gary N Parkinson; John E Ladbury
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-23       Impact factor: 11.205

Review 4.  Programmed heterogeneity: epigenetic mechanisms in bacteria.

Authors:  Josep Casadesús; David A Low
Journal:  J Biol Chem       Date:  2013-04-16       Impact factor: 5.157

5.  Interaction of the Escherichia coli HU protein with DNA. Evidence for formation of nucleosome-like structures with altered DNA helical pitch.

Authors:  S S Broyles; D E Pettijohn
Journal:  J Mol Biol       Date:  1986-01-05       Impact factor: 5.469

6.  Replication fork passage drives asymmetric dynamics of a critical nucleoid-associated protein in Caulobacter.

Authors:  Rodrigo Arias-Cartin; Genevieve S Dobihal; Manuel Campos; Ivan V Surovtsev; Bradley Parry; Christine Jacobs-Wagner
Journal:  EMBO J       Date:  2016-12-23       Impact factor: 11.598

7.  Structural insights into the regulation of foreign genes in Salmonella by the Hha/H-NS complex.

Authors:  Sabrina S Ali; John C Whitney; James Stevenson; Howard Robinson; P Lynne Howell; William Wiley Navarre
Journal:  J Biol Chem       Date:  2013-03-20       Impact factor: 5.157

8.  Nucleoid occlusion protein Noc recruits DNA to the bacterial cell membrane.

Authors:  David William Adams; Ling Juan Wu; Jeff Errington
Journal:  EMBO J       Date:  2015-01-07       Impact factor: 11.598

9.  Genes on a Wire: The Nucleoid-Associated Protein HU Insulates Transcription Units in Escherichia coli.

Authors:  Michael Berger; Veneta Gerganova; Petya Berger; Radu Rapiteanu; Viktoras Lisicovas; Ulrich Dobrindt
Journal:  Sci Rep       Date:  2016-08-22       Impact factor: 4.379

10.  StpA and Hha stimulate pausing by RNA polymerase by promoting DNA-DNA bridging of H-NS filaments.

Authors:  Beth A Boudreau; Daniel R Hron; Liang Qin; Ramon A van der Valk; Matthew V Kotlajich; Remus T Dame; Robert Landick
Journal:  Nucleic Acids Res       Date:  2018-06-20       Impact factor: 19.160

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  2 in total

1.  Self-assembled nucleoid proteins scaffold bacterial DNA.

Authors:  Haiqing Zhao
Journal:  Biophys J       Date:  2021-02-05       Impact factor: 4.033

2.  Generation of Bacterial Diversity by Segregation of DNA Strands.

Authors:  Vic Norris; Camille Ripoll
Journal:  Front Microbiol       Date:  2021-03-22       Impact factor: 5.640

  2 in total

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