Literature DB >> 26460028

Contribution of a mutational hot spot to hemoglobin adaptation in high-altitude Andean house wrens.

Spencer C Galen1, Chandrasekhar Natarajan2, Hideaki Moriyama2, Roy E Weber3, Angela Fago3, Phred M Benham4, Andrea N Chavez1, Zachary A Cheviron4, Jay F Storz5, Christopher C Witt6.   

Abstract

A key question in evolutionary genetics is why certain mutations or certain types of mutation make disproportionate contributions to adaptive phenotypic evolution. In principle, the preferential fixation of particular mutations could stem directly from variation in the underlying rate of mutation to function-altering alleles. However, the influence of mutation bias on the genetic architecture of phenotypic evolution is difficult to evaluate because data on rates of mutation to function-altering alleles are seldom available. Here, we report the discovery that a single point mutation at a highly mutable site in the β(A)-globin gene has contributed to an evolutionary change in hemoglobin (Hb) function in high-altitude Andean house wrens (Troglodytes aedon). Results of experiments on native Hb variants and engineered, recombinant Hb mutants demonstrate that a nonsynonymous mutation at a CpG dinucleotide in the β(A)-globin gene is responsible for an evolved difference in Hb-O2 affinity between high- and low-altitude house wren populations. Moreover, patterns of genomic differentiation between high- and low-altitude populations suggest that altitudinal differentiation in allele frequencies at the causal amino acid polymorphism reflects a history of spatially varying selection. The experimental results highlight the influence of mutation rate on the genetic basis of phenotypic evolution by demonstrating that a large-effect allele at a highly mutable CpG site has promoted physiological differentiation in blood O2 transport capacity between house wren populations that are native to different elevations.

Entities:  

Keywords:  biochemical adaptation; hemoglobin; high altitude; hypoxia; mutation bias

Mesh:

Substances:

Year:  2015        PMID: 26460028      PMCID: PMC4653164          DOI: 10.1073/pnas.1507300112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  59 in total

1.  Bias in the introduction of variation as an orienting factor in evolution.

Authors:  L Y Yampolsky; A Stoltzfus
Journal:  Evol Dev       Date:  2001 Mar-Apr       Impact factor: 1.930

2.  Fisher's model and the genomics of adaptation: restricted pleiotropy, heterogenous mutation, and parallel evolution.

Authors:  Luis-Miguel Chevin; Guillaume Martin; Thomas Lenormand
Journal:  Evolution       Date:  2010-11       Impact factor: 3.694

3.  Hemoglobin function and allosteric regulation in semi-fossorial rodents (family Sciuridae) with different altitudinal ranges.

Authors:  Inge G Revsbech; Danielle M Tufts; Joana Projecto-Garcia; Hideaki Moriyama; Roy E Weber; Jay F Storz; Angela Fago
Journal:  J Exp Biol       Date:  2013-11-15       Impact factor: 3.312

Review 4.  Mechanisms of cooperativity and allosteric regulation in proteins.

Authors:  M F Perutz
Journal:  Q Rev Biophys       Date:  1989-05       Impact factor: 5.318

5.  Integrating evolutionary and functional tests of adaptive hypotheses: a case study of altitudinal differentiation in hemoglobin function in an Andean Sparrow, Zonotrichia capensis.

Authors:  Zachary A Cheviron; Chandrasekhar Natarajan; Joana Projecto-Garcia; Douglas K Eddy; Jennifer Jones; Matthew D Carling; Christopher C Witt; Hideaki Moriyama; Roy E Weber; Angela Fago; Jay F Storz
Journal:  Mol Biol Evol       Date:  2014-08-18       Impact factor: 16.240

Review 6.  Gene duplication, genome duplication, and the functional diversification of vertebrate globins.

Authors:  Jay F Storz; Juan C Opazo; Federico G Hoffmann
Journal:  Mol Phylogenet Evol       Date:  2012-07-27       Impact factor: 4.286

Review 7.  High-altitude adaptations in vertebrate hemoglobins.

Authors:  Roy E Weber
Journal:  Respir Physiol Neurobiol       Date:  2007-05-10       Impact factor: 1.931

8.  Epistasis among adaptive mutations in deer mouse hemoglobin.

Authors:  Chandrasekhar Natarajan; Noriko Inoguchi; Roy E Weber; Angela Fago; Hideaki Moriyama; Jay F Storz
Journal:  Science       Date:  2013-06-14       Impact factor: 47.728

9.  Protein frustratometer: a tool to localize energetic frustration in protein molecules.

Authors:  Michael Jenik; R Gonzalo Parra; Leandro G Radusky; Adrian Turjanski; Peter G Wolynes; Diego U Ferreiro
Journal:  Nucleic Acids Res       Date:  2012-05-29       Impact factor: 16.971

10.  Intraspecific polymorphism, interspecific divergence, and the origins of function-altering mutations in deer mouse hemoglobin.

Authors:  Chandrasekhar Natarajan; Federico G Hoffmann; Hayley C Lanier; Cole J Wolf; Zachary A Cheviron; Matthew L Spangler; Roy E Weber; Angela Fago; Jay F Storz
Journal:  Mol Biol Evol       Date:  2015-01-02       Impact factor: 16.240

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  40 in total

1.  Mutation-biased adaptation in Andean house wrens.

Authors:  Arlin Stoltzfus; David M McCandlish
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-21       Impact factor: 11.205

2.  Genomic analysis of snub-nosed monkeys (Rhinopithecus) identifies genes and processes related to high-altitude adaptation.

Authors:  Li Yu; Guo-Dong Wang; Jue Ruan; Yong-Bin Chen; Cui-Ping Yang; Xue Cao; Hong Wu; Yan-Hu Liu; Zheng-Lin Du; Xiao-Ping Wang; Jing Yang; Shao-Chen Cheng; Li Zhong; Lu Wang; Xuan Wang; Jing-Yang Hu; Lu Fang; Bing Bai; Kai-Le Wang; Na Yuan; Shi-Fang Wu; Bao-Guo Li; Jin-Guo Zhang; Ye-Qin Yang; Cheng-Lin Zhang; Yong-Cheng Long; Hai-Shu Li; Jing-Yuan Yang; David M Irwin; Oliver A Ryder; Ying Li; Chung-I Wu; Ya-Ping Zhang
Journal:  Nat Genet       Date:  2016-07-11       Impact factor: 38.330

3.  Evolution of physiological performance capacities and environmental adaptation: insights from high-elevation deer mice (Peromyscus maniculatus).

Authors:  Jay F Storz; Zachary A Cheviron; Grant B McClelland; Graham R Scott
Journal:  J Mammal       Date:  2019-05-23       Impact factor: 2.416

4.  The role of mutation bias in adaptive molecular evolution: insights from convergent changes in protein function.

Authors:  Jay F Storz; Chandrasekhar Natarajan; Anthony V Signore; Christopher C Witt; David M McCandlish; Arlin Stoltzfus
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-06-03       Impact factor: 6.237

Review 5.  Gene Duplication and Evolutionary Innovations in Hemoglobin-Oxygen Transport.

Authors:  Jay F Storz
Journal:  Physiology (Bethesda)       Date:  2016-05

6.  Protein Frustratometer 2: a tool to localize energetic frustration in protein molecules, now with electrostatics.

Authors:  R Gonzalo Parra; Nicholas P Schafer; Leandro G Radusky; Min-Yeh Tsai; A Brenda Guzovsky; Peter G Wolynes; Diego U Ferreiro
Journal:  Nucleic Acids Res       Date:  2016-04-29       Impact factor: 16.971

7.  Physiological Genomics of Adaptation to High-Altitude Hypoxia.

Authors:  Jay F Storz; Zachary A Cheviron
Journal:  Annu Rev Anim Biosci       Date:  2020-11-23       Impact factor: 8.923

8.  Mutation-Driven Parallel Evolution during Viral Adaptation.

Authors:  Andrew M Sackman; Lindsey W McGee; Anneliese J Morrison; Jessica Pierce; Jeremy Anisman; Hunter Hamilton; Stephanie Sanderbeck; Cayla Newman; Darin R Rokyta
Journal:  Mol Biol Evol       Date:  2017-12-01       Impact factor: 16.240

Review 9.  Causes of molecular convergence and parallelism in protein evolution.

Authors:  Jay F Storz
Journal:  Nat Rev Genet       Date:  2016-03-14       Impact factor: 53.242

Review 10.  Functional Genomic Insights into Regulatory Mechanisms of High-Altitude Adaptation.

Authors:  Jay F Storz; Zachary A Cheviron
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

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