Literature DB >> 25135942

Integrating evolutionary and functional tests of adaptive hypotheses: a case study of altitudinal differentiation in hemoglobin function in an Andean Sparrow, Zonotrichia capensis.

Zachary A Cheviron1, Chandrasekhar Natarajan2, Joana Projecto-Garcia2, Douglas K Eddy3, Jennifer Jones3, Matthew D Carling4, Christopher C Witt5, Hideaki Moriyama2, Roy E Weber6, Angela Fago6, Jay F Storz7.   

Abstract

In air-breathing vertebrates, the physiologically optimal blood-O2 affinity is jointly determined by the prevailing partial pressure of atmospheric O2, the efficacy of pulmonary O2 transfer, and internal metabolic demands. Consequently, genetic variation in the oxygenation properties of hemoglobin (Hb) may be subject to spatially varying selection in species with broad elevational distributions. Here we report the results of a combined functional and evolutionary analysis of Hb polymorphism in the rufous-collared sparrow (Zonotrichia capensis), a species that is continuously distributed across a steep elevational gradient on the Pacific slope of the Peruvian Andes. We integrated a population genomic analysis that included all postnatally expressed Hb genes with functional studies of naturally occurring Hb variants, as well as recombinant Hb (rHb) mutants that were engineered through site-directed mutagenesis. We identified three clinally varying amino acid polymorphisms: Two in the α(A)-globin gene, which encodes the α-chain subunits of the major HbA isoform, and one in the α(D)-globin gene, which encodes the α-chain subunits of the minor HbD isoform. We then constructed and experimentally tested single- and double-mutant rHbs representing each of the alternative α(A)-globin genotypes that predominate at different elevations. Although the locus-specific patterns of altitudinal differentiation suggested a history of spatially varying selection acting on Hb polymorphism, the experimental tests demonstrated that the observed amino acid mutations have no discernible effect on respiratory properties of the HbA or HbD isoforms. These results highlight the importance of experimentally validating the hypothesized effects of genetic changes in protein function to avoid the pitfalls of adaptive storytelling.
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Entities:  

Keywords:  adaptation; functional synthesis; high-altitude adaptation; hypoxia; protein evolution

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Year:  2014        PMID: 25135942      PMCID: PMC4209134          DOI: 10.1093/molbev/msu234

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  81 in total

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Authors:  M Stephens; N J Smith; P Donnelly
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2.  Effect of a shift of the oxygen dissociation curve on myocardial oxygenation at hypoxia.

Authors:  Z Turek; F Kreuzer
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3.  A comparison of bayesian methods for haplotype reconstruction from population genotype data.

Authors:  Matthew Stephens; Peter Donnelly
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4.  Structural and functional analysis of the two haemoglobins of the antarctic seabird Catharacta maccormicki characterization of an additional phosphate binding site by molecular modelling.

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Review 5.  Haemoglobin function in vertebrates: evolutionary changes in cellular regulation in hypoxia.

Authors:  M Nikinmaa
Journal:  Respir Physiol       Date:  2001-11-15

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Authors:  A Riccio; M Tamburrini; B Giardina; G di Prisco
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

7.  Causes of high blood O2 affinity of animals living at high altitude.

Authors:  D Petschow; I Würdinger; R Baumann; J Duhm; G Braunitzer; C Bauer
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8.  Novel mechanism for high-altitude adaptation in hemoglobin of the Andean frog Telmatobius peruvianus.

Authors:  Roy E Weber; Hrvoj Ostojic; Angela Fago; Sylvia Dewilde; Marie-Louise Van Hauwaert; Luc Moens; Carlos Monge
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2002-11       Impact factor: 3.619

9.  Modulation of red cell glycolysis: interactions between vertebrate hemoglobins and cytoplasmic domains of band 3 red cell membrane proteins.

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Review 10.  Oxygen transport in blood at high altitude: role of the hemoglobin-oxygen affinity and impact of the phenomena related to hemoglobin allosterism and red cell function.

Authors:  Michele Samaja; Tiziano Crespi; Marco Guazzi; Kim D Vandegriff
Journal:  Eur J Appl Physiol       Date:  2003-09-18       Impact factor: 3.078

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  35 in total

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Authors:  Jay F Storz; Jamie T Bridgham; Scott A Kelly; Theodore Garland
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2015-06-03       Impact factor: 3.619

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Review 4.  Gene Duplication and Evolutionary Innovations in Hemoglobin-Oxygen Transport.

Authors:  Jay F Storz
Journal:  Physiology (Bethesda)       Date:  2016-05

5.  Physiological Genomics of Adaptation to High-Altitude Hypoxia.

Authors:  Jay F Storz; Zachary A Cheviron
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6.  Contribution of a mutational hot spot to hemoglobin adaptation in high-altitude Andean house wrens.

Authors:  Spencer C Galen; Chandrasekhar Natarajan; Hideaki Moriyama; Roy E Weber; Angela Fago; Phred M Benham; Andrea N Chavez; Zachary A Cheviron; Jay F Storz; Christopher C Witt
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-12       Impact factor: 11.205

7.  Divergent and parallel routes of biochemical adaptation in high-altitude passerine birds from the Qinghai-Tibet Plateau.

Authors:  Xiaojia Zhu; Yuyan Guan; Anthony V Signore; Chandrasekhar Natarajan; Shane G DuBay; Yalin Cheng; Naijian Han; Gang Song; Yanhua Qu; Hideaki Moriyama; Federico G Hoffmann; Angela Fago; Fumin Lei; Jay F Storz
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8.  Predictable convergence in hemoglobin function has unpredictable molecular underpinnings.

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9.  Synthesis of Recombinant Human Hemoglobin With NH2 -Terminal Acetylation in Escherichia coli.

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Review 10.  Functional Genomic Insights into Regulatory Mechanisms of High-Altitude Adaptation.

Authors:  Jay F Storz; Zachary A Cheviron
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