Literature DB >> 26457426

Acoustic vibrations contribute to the diffuse scatter produced by ribosome crystals.

Yury S Polikanov1, Peter B Moore2.   

Abstract

The diffuse scattering pattern produced by frozen crystals of the 70S ribosome from Thermus thermophilus is as highly structured as it would be if it resulted entirely from domain-scale motions within these particles. However, the qualitative properties of the scattering pattern suggest that acoustic displacements of the crystal lattice make a major contribution to it.

Entities:  

Keywords:  diffuse scatter; lattice vibrations; ribosome crystals

Mesh:

Year:  2015        PMID: 26457426      PMCID: PMC4601367          DOI: 10.1107/S1399004715013838

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  22 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-29       Impact factor: 11.205

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Journal:  Nature       Date:  1988-04-14       Impact factor: 49.962

10.  Crystal cryocooling distorts conformational heterogeneity in a model Michaelis complex of DHFR.

Authors:  Daniel A Keedy; Henry van den Bedem; David A Sivak; Gregory A Petsko; Dagmar Ringe; Mark A Wilson; James S Fraser
Journal:  Structure       Date:  2014-05-29       Impact factor: 5.006

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  10 in total

Review 1.  X-ray Scattering Studies of Protein Structural Dynamics.

Authors:  Steve P Meisburger; William C Thomas; Maxwell B Watkins; Nozomi Ando
Journal:  Chem Rev       Date:  2017-05-30       Impact factor: 60.622

2.  Measuring and modeling diffuse scattering in protein X-ray crystallography.

Authors:  Andrew H Van Benschoten; Lin Liu; Ana Gonzalez; Aaron S Brewster; Nicholas K Sauter; James S Fraser; Michael E Wall
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-28       Impact factor: 11.205

3.  Correlated Motions from Crystallography beyond Diffraction.

Authors:  Steve P Meisburger; Nozomi Ando
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Journal:  Nat Commun       Date:  2020-03-09       Impact factor: 14.919

5.  Molecular Dynamics Simulations of Macromolecular Crystals.

Authors:  David S Cerutti; David A Case
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Authors:  Da Xu; Steve P Meisburger; Nozomi Ando
Journal:  Biochemistry       Date:  2021-07-22       Impact factor: 3.321

7.  Intermolecular correlations are necessary to explain diffuse scattering from protein crystals.

Authors:  Ariana Peck; Frédéric Poitevin; Thomas J Lane
Journal:  IUCrJ       Date:  2018-02-21       Impact factor: 4.769

8.  Internal protein motions in molecular-dynamics simulations of Bragg and diffuse X-ray scattering.

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Journal:  IUCrJ       Date:  2018-01-25       Impact factor: 4.769

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Authors:  Michael E Wall; Alexander M Wolff; James S Fraser
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10.  Liquid-like and rigid-body motions in molecular-dynamics simulations of a crystalline protein.

Authors:  David C Wych; James S Fraser; David L Mobley; Michael E Wall
Journal:  Struct Dyn       Date:  2019-12-18       Impact factor: 2.920

  10 in total

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