| Literature DB >> 26448936 |
Wei-Lun Huang1, Fang Wei2, David T Wong2, Chien-Chung Lin3, Wu-Chou Su3.
Abstract
The advances in targeted therapies for lung cancer are based on the evaluation of specific gene mutations especially the epidermal growth factor receptor (EGFR). The assays largely depend on the acquisition of tumor tissue via biopsy before the initiation of therapy or after the onset of acquired resistance. However, the limitations of tissue biopsy including tumor heterogeneity and insufficient tissues for molecular testing are impotent clinical obstacles for mutation analysis and lung cancer treatment. Due to the invasive procedure of tissue biopsy and the progressive development of drug-resistant EGFR mutations, the effective initial detection and continuous monitoring of EGFR mutations are still unmet requirements. Circulating tumor DNA (ctDNA) detection is a promising biomarker for noninvasive assessment of cancer burden. Recent advancement of sensitive techniques in detecting EGFR mutations using ctDNA enables a broad range of clinical applications, including early detection of disease, prediction of treatment responses, and disease progression. This review not only introduces the biology and clinical implementations of ctDNA but also includes the updating information of recent advancement of techniques for detecting EGFR mutation using ctDNA in lung cancer.Entities:
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Year: 2015 PMID: 26448936 PMCID: PMC4584057 DOI: 10.1155/2015/340732
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Figure 1Source and biology of ctDNA.
Recent advancement of techniques for detecting EGFR mutation using ctDNA in lung cancer.
| Study team | Sample | Oncogene mutation | Sample size | Method | Conclusion |
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| Wang et al. | Plasma | EGFR | 68 (III/IV) | ARMS/Scorpion assay | Sensitivity (22.06%), specificity (96.97%), positive predictive value (88.24%), and negative predictive value (54.70%) [ |
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| Liu et al. | Plasma | EGFR | 86 (III/IV) | ARMS | Sensitivity (67.5%), specificity (100%), and concordance rate was 84.9% [ |
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| Goto et al. | Plasma | EGFR | 86 (III/IV) | ARMS/Scorpion assay | Sensitivity (43.1%), specificity (100%), positive predictive value (100%), negative predictive value (54.7%), and concordance ratio (66.3%) [ |
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| Kimura et al. | Plasma | EGFR | 42 (advanced stage) | ARMS/Scorpion assay | Sensitivity (85.7%), specificity (94.2%), and concordance ratio (92.9%) [ |
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| Kimura et al. | Plasma | EGFR | 27 (III/IV) | ARMS/Scorpion | Detection rate 48.1% [ |
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| Yung et al. | Plasma | EGFR | 35 (III/IV) | Digital PCR | Sensitivity (92%) and specificity (100%) [ |
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| Brevet et al. | Plasma | EGFR | 34 (III/IV) | Mass spectrometry genotyping | Detection rate 61% [ |
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| Hu et al. | Plasma | EGFR | 24 (I/II/III/IV) | High-resolution melting analysis | Positive rate was 100% for patients in stages II–IV, 81.8% (9/11) for stage I. The sensitivity was 91.67% and specificity was 100% [ |
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| Zhao et al. | Plasma | EGFR | 111 (I/II/III/IV) | Mutant-enriched PCR | Concordance ratio (71.2%), sensitivity (35.6%), and specificity (95.5%). Sensitivity varied according to the disease stage and pathological differentiation; early stage (10%) versus advanced stage (56%). Highly differentiated (20%) patients and moderately differentiated (19%) and poorly differentiated subgroup (77.8%) [ |
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| Jiang et al. | Plasma | EGFR | 58 (III/IV) | Mutant-enriched PCR | Sensitivity (77.8%), specificity (100%), and concordance rate (93.1%), more sensitive than the nonenriched assay [ |
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| Bai et al. | Plasma | EGFR | 230 (III/IV) | DHPLC | Sensitivity 81.8% and specificity 89.5% [ |
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| Kim et al. | Plasma | EGFR | 35 (III/IV) | PNA-mediated PCR | Concordance in the serum and tumor samples was 17% [ |
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| Kim et al. | Plasma | EGFR | 57 (III/IV) | PNA–LNA PCR clamp | Concordance in the serum and tumor samples was 87.7% [ |
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| Xu et al. | Plasma | EGFR | 51 (III/IV) | ARMS/Scorpion assay | Sensitivity (50.0%) Specificity (100%) [ |
| Mutant-enriched PCR | Sensitivity (25.0%) Specificity (96.2%) | ||||
| DHPLC | Sensitivity (25.0%) Specificity (92.3%) | ||||
| 60 (III/IV) | Direct sequencing versus Mutant-enriched PCR | Sensitivity 18.3% versus 55.0% [ | |||
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| Kuang et al. | Plasma | EGFR | 54 (III/IV) | ARMS/Scorpion assay | Detected in 54% of patients with prior clinical response to TKI and 29% of prior stable disease [ |
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| Taniguchi et al. | Plasma | EGFR | 44 (III/IV) | BEAMing | 82.6% detection rate in patient who developed PD after EGFR TKI and 43.5% detection rate in patients were never treated with EGFR TKI [ |
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| Sakai et al. | Plasma | EGFR | 75 (III/IV) | Mass spectrometry genotyping | 28% detection rate in patient who developed PD after EGFR TKI [ |
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| Kukita et al. | Plasma | EGFR | 144 (III/IV) | Next-generation sequencers: Ion Torrent PGM | 72.7% detection rate in exon 19 deletion, 78.2% detection rate in L858R or L861Q [ |
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| Couraud et al. | Plasma | EGFR (exons 18, 19, 20, and 21) | 68 (I/II/III/IV) | Next-generation sequencers: Ion Torrent PGM | Sensitivity ranged from 55% (EGFR exon 19) to 100% (EGFR exon 18) Considering all amplicons, the sensitivity was 58% and the concordance rate was 68% [ |
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| Wei et al. | Saliva | EGFR | 40 (III/IV) | EFIRM | Exon 19 Del (AUCs = 0.94, 95% CI, 0.82–1) and L858R (AUCs = 0.96, 95% CI, 0.90–1) [ |
ARMS: amplification-refractory mutation system; DHPLC: denaturing high performance liquid chromatography; PNA: peptide nucleic acid; PNA-LNA: peptide nucleic acid-locked nucleic acid; BEAMing: beads, emulsions, amplification, and magnetics; NGS: next-generation sequencing; Ion Torrent PGM: Ion Torrent Personal Genome Machine (PGM) System; EFIRM: electric field-induced release and measurement.