Literature DB >> 26335718

Circadian Rhythms in Cyanobacteria.

Susan E Cohen1, Susan S Golden2.   

Abstract

Life on earth is subject to daily and predictable fluctuations in light intensity, temperature, and humidity created by rotation of the earth. Circadian rhythms, generated by a circadian clock, control temporal programs of cellular physiology to facilitate adaptation to daily environmental changes. Circadian rhythms are nearly ubiquitous and are found in both prokaryotic and eukaryotic organisms. Here we introduce the molecular mechanism of the circadian clock in the model cyanobacterium Synechococcus elongatus PCC 7942. We review the current understanding of the cyanobacterial clock, emphasizing recent work that has generated a more comprehensive understanding of how the circadian oscillator becomes synchronized with the external environment and how information from the oscillator is transmitted to generate rhythms of biological activity. These results have changed how we think about the clock, shifting away from a linear model to one in which the clock is viewed as an interactive network of multifunctional components that are integrated into the context of the cell in order to pace and reset the oscillator. We conclude with a discussion of how this basic timekeeping mechanism differs in other cyanobacterial species and how information gleaned from work in cyanobacteria can be translated to understanding rhythmic phenomena in other prokaryotic systems.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 26335718      PMCID: PMC4557074          DOI: 10.1128/MMBR.00036-15

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  100 in total

1.  Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria.

Authors:  T Nishiwaki; H Iwasaki; M Ishiura; T Kondo
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

2.  Origin and evolution of circadian clock genes in prokaryotes.

Authors:  Volodymyr Dvornyk; Oxana Vinogradova; Eviatar Nevo
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

3.  Visualizing a circadian clock protein: crystal structure of KaiC and functional insights.

Authors:  Rekha Pattanayek; Jimin Wang; Tetsuya Mori; Yao Xu; Carl Hirschie Johnson; Martin Egli
Journal:  Mol Cell       Date:  2004-08-13       Impact factor: 17.970

4.  LdpA: a component of the circadian clock senses redox state of the cell.

Authors:  Natalia B Ivleva; Matthew R Bramlett; Paul A Lindahl; Susan S Golden
Journal:  EMBO J       Date:  2005-03-10       Impact factor: 11.598

5.  Transcriptional regulation of the circadian clock operon kaiBC by upstream regions in cyanobacteria.

Authors:  Shinsuke Kutsuna; Yoichi Nakahira; Mitsunori Katayama; Masahiro Ishiura; Takao Kondo
Journal:  Mol Microbiol       Date:  2005-09       Impact factor: 3.501

6.  Circadian Rhythm of the Prokaryote Synechococcus sp. RF-1.

Authors:  T C Huang; J Tu; T J Chow; T H Chen
Journal:  Plant Physiol       Date:  1990-02       Impact factor: 8.340

7.  A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria.

Authors:  Taeko Nishiwaki; Yoshinori Satomi; Yohko Kitayama; Kazuki Terauchi; Reiko Kiyohara; Toshifumi Takao; Takao Kondo
Journal:  EMBO J       Date:  2007-08-23       Impact factor: 11.598

8.  Three major output pathways from the KaiABC-based oscillator cooperate to generate robust circadian kaiBC expression in cyanobacteria.

Authors:  Yasuhito Taniguchi; Naoki Takai; Mitsunori Katayama; Takao Kondo; Tokitaka Oyama
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-28       Impact factor: 11.205

9.  Circadian rhythms in rapidly dividing cyanobacteria.

Authors:  T Kondo; T Mori; N V Lebedeva; S Aoki; M Ishiura; S S Golden
Journal:  Science       Date:  1997-01-10       Impact factor: 47.728

10.  Light-dependent expression of four cryptic archaeal circadian gene homologs.

Authors:  Michael Maniscalco; Jennifer Nannen; Valerie Sodi; Gillian Silver; Phillip L Lowrey; Kelly A Bidle
Journal:  Front Microbiol       Date:  2014-03-04       Impact factor: 5.640

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  63 in total

Review 1.  Timing the day: what makes bacterial clocks tick?

Authors:  Carl Hirschie Johnson; Chi Zhao; Yao Xu; Tetsuya Mori
Journal:  Nat Rev Microbiol       Date:  2017-02-20       Impact factor: 60.633

2.  Phototaxis in a wild isolate of the cyanobacterium Synechococcus elongatus.

Authors:  Yiling Yang; Vinson Lam; Marie Adomako; Ryan Simkovsky; Annik Jakob; Nathan C Rockwell; Susan E Cohen; Arnaud Taton; Jingtong Wang; J Clark Lagarias; Annegret Wilde; David R Nobles; Jerry J Brand; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-14       Impact factor: 11.205

Review 3.  Gut microbiota as a transducer of dietary cues to regulate host circadian rhythms and metabolism.

Authors:  Hyoann Choi; Mrinalini C Rao; Eugene B Chang
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2021-05-17       Impact factor: 46.802

4.  Genome-wide fitness assessment during diurnal growth reveals an expanded role of the cyanobacterial circadian clock protein KaiA.

Authors:  David G Welkie; Benjamin E Rubin; Yong-Gang Chang; Spencer Diamond; Scott A Rifkin; Andy LiWang; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-10       Impact factor: 11.205

5.  Light Modulates the Physiology of Nonphototrophic Actinobacteria.

Authors:  Julia A Maresca; Jessica L Keffer; Priscilla P Hempel; Shawn W Polson; Olga Shevchenko; Jaysheel Bhavsar; Deborah Powell; Kelsey J Miller; Archana Singh; Martin W Hahn
Journal:  J Bacteriol       Date:  2019-04-24       Impact factor: 3.490

6.  Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations.

Authors:  Stefan Lambert; Margot Tragin; Jean-Claude Lozano; Jean-François Ghiglione; Daniel Vaulot; François-Yves Bouget; Pierre E Galand
Journal:  ISME J       Date:  2018-09-25       Impact factor: 10.302

7.  Roles for ClpXP in regulating the circadian clock in Synechococcus elongatus.

Authors:  Susan E Cohen; Briana M McKnight; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-30       Impact factor: 11.205

8.  Redox crisis underlies conditional light-dark lethality in cyanobacterial mutants that lack the circadian regulator, RpaA.

Authors:  Spencer Diamond; Benjamin E Rubin; Ryan K Shultzaberger; You Chen; Chase D Barber; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-10       Impact factor: 11.205

Review 9.  Circadian Oscillators: Around the Transcription-Translation Feedback Loop and on to Output.

Authors:  Jennifer M Hurley; Jennifer J Loros; Jay C Dunlap
Journal:  Trends Biochem Sci       Date:  2016-08-03       Impact factor: 13.807

10.  Composition and functional property of photosynthetic pigments under circadian rhythm in the cyanobacterium Spirulina platensis.

Authors:  Deepak Kumar; Vinod K Kannaujiya; Jainendra Pathak; Shanthy Sundaram; Rajeshwar P Sinha
Journal:  Protoplasma       Date:  2017-12-19       Impact factor: 3.356

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