Literature DB >> 10618446

Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria.

T Nishiwaki1, H Iwasaki, M Ishiura, T Kondo.   

Abstract

A negative feedback control of kaiC expression by KaiC protein has been proposed to generate a basic oscillation of the circadian clock in the cyanobacterium Synechococcus sp. PCC 7942. KaiC has two P loops or Walker's motif As, that are potential ATP-/GTP-binding motifs and DXXG motifs conserved in various GTP-binding proteins. Herein, we demonstrate that in vitro KaiC binds ATP and, with lower affinity, GTP. Point mutation by site-directed mutagenesis of P loop 1 completely nullified the circadian rhythm of kaiBC expression and markedly reduced ATP-binding activity. Moreover, KaiC can be autophosphorylated in vitro. These results suggest that the nucleotide-binding activity of KaiC plays important roles in the generation of circadian oscillation in cyanobacteria.

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Year:  2000        PMID: 10618446      PMCID: PMC26691          DOI: 10.1073/pnas.97.1.495

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

Review 1.  Life among the primitives: protein O-phosphatases in prokaryotes.

Authors:  P J Kennelly; M Potts
Journal:  Front Biosci       Date:  1999-03-15

2.  On the binding of ATP to the autophosphorylating protein, Ptk, of the bacterium Acinetobacter johnsonii.

Authors:  P Doublet; C Vincent; C Grangeasse; A J Cozzone; B Duclos
Journal:  FEBS Lett       Date:  1999-02-19       Impact factor: 4.124

3.  Chemical properties and separation of phosphoamino acids by thin-layer chromatography and/or electrophoresis.

Authors:  B Duclos; S Marcandier; A J Cozzone
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

4.  Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria.

Authors:  M Ishiura; S Kutsuna; S Aoki; H Iwasaki; C R Andersson; A Tanabe; S S Golden; C H Johnson; T Kondo
Journal:  Science       Date:  1998-09-04       Impact factor: 47.728

5.  A period-extender gene, pex, that extends the period of the circadian clock in the cyanobacterium Synechococcus sp. strain PCC 7942.

Authors:  S Kutsuna; T Kondo; S Aoki; M Ishiura
Journal:  J Bacteriol       Date:  1998-04       Impact factor: 3.490

6.  X-ray crystal structures of transforming p21 ras mutants suggest a transition-state stabilization mechanism for GTP hydrolysis.

Authors:  G G Privé; M V Milburn; L Tong; A M de Vos; Z Yamaizumi; S Nishimura; S H Kim
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-15       Impact factor: 11.205

7.  Purification and characterization of the Myxococcus xanthus FrzE protein shows that it has autophosphorylation activity.

Authors:  W R McCleary; D R Zusman
Journal:  J Bacteriol       Date:  1990-12       Impact factor: 3.490

8.  The Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon.

Authors:  B Kloss; J L Price; L Saez; J Blau; A Rothenfluh; C S Wesley; M W Young
Journal:  Cell       Date:  1998-07-10       Impact factor: 41.582

9.  Refined crystal structure of the triphosphate conformation of H-ras p21 at 1.35 A resolution: implications for the mechanism of GTP hydrolysis.

Authors:  E F Pai; U Krengel; G A Petsko; R S Goody; W Kabsch; A Wittinghofer
Journal:  EMBO J       Date:  1990-08       Impact factor: 11.598

10.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

Authors:  J E Walker; M Saraste; M J Runswick; N J Gay
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  74 in total

1.  Circadian clock-protein expression in cyanobacteria: rhythms and phase setting.

Authors:  Y Xu; T Mori; C H Johnson
Journal:  EMBO J       Date:  2000-07-03       Impact factor: 11.598

2.  Long-term microclimatic stress causes rapid adaptive radiation of kaiABC clock gene family in a cyanobacterium, Nostoc linckia, from "Evolution Canyons" I and II, Israel.

Authors:  Volodymyr Dvornyk; Oxana Vinogradova; Eviatar Nevo
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-12       Impact factor: 11.205

3.  Origin and evolution of circadian clock genes in prokaryotes.

Authors:  Volodymyr Dvornyk; Oxana Vinogradova; Eviatar Nevo
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

4.  Circadian clock protein KaiC forms ATP-dependent hexameric rings and binds DNA.

Authors:  Tetsuya Mori; Sergei V Saveliev; Yao Xu; Walter F Stafford; Michael M Cox; Ross B Inman; Carl H Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

5.  Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism.

Authors:  Stanly B Williams; Ioannis Vakonakis; Susan S Golden; Andy C LiWang
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-15       Impact factor: 11.205

6.  Roles for sigma factors in global circadian regulation of the cyanobacterial genome.

Authors:  Usha Nair; Jayna L Ditty; Hongtao Min; Susan S Golden
Journal:  J Bacteriol       Date:  2002-07       Impact factor: 3.490

7.  KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria.

Authors:  Hideo Iwasaki; Taeko Nishiwaki; Yohko Kitayama; Masato Nakajima; Takao Kondo
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-21       Impact factor: 11.205

8.  Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC.

Authors:  Yao Xu; Tetsuya Mori; Carl Hirschie Johnson
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

9.  KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system.

Authors:  Yohko Kitayama; Hideo Iwasaki; Taeko Nishiwaki; Takao Kondo
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598

10.  Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses.

Authors:  Yao Xu; Tetsuya Mori; Rekha Pattanayek; Sabuj Pattanayek; Martin Egli; Carl Hirschie Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-03       Impact factor: 11.205

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