Literature DB >> 26276833

The Plant Peptidome: An Expanding Repertoire of Structural Features and Biological Functions.

Patrizia Tavormina1, Barbara De Coninck1, Natalia Nikonorova2, Ive De Smet3, Bruno P A Cammue4.   

Abstract

Peptides fulfill a plethora of functions in plant growth, development, and stress responses. They act as key components of cell-to-cell communication, interfere with signaling and response pathways, or display antimicrobial activity. Strikingly, both the diversity and amount of plant peptides have been largely underestimated. Most characterized plant peptides to date acting as small signaling peptides or antimicrobial peptides are derived from nonfunctional precursor proteins. However, evidence is emerging on peptides derived from a functional protein, directly translated from small open reading frames (without the involvement of a precursor) or even encoded by primary transcripts of microRNAs. These novel types of peptides further add to the complexity of the plant peptidome, even though their number is still limited and functional characterization as well as translational evidence are often controversial. Here, we provide a comprehensive overview of the reported types of plant peptides, including their described functional and structural properties. We propose a novel, unifying peptide classification system to emphasize the enormous diversity in peptide synthesis and consequent complexity of the still expanding knowledge on the plant peptidome.
© 2015 American Society of Plant Biologists. All rights reserved.

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Year:  2015        PMID: 26276833      PMCID: PMC4568509          DOI: 10.1105/tpc.15.00440

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  278 in total

1.  A large family of genes that share homology with CLAVATA3.

Authors:  J M Cock; S McCormick
Journal:  Plant Physiol       Date:  2001-07       Impact factor: 8.340

2.  From elicitins to lipid-transfer proteins: a new insight in cell signalling involved in plant defence mechanisms.

Authors:  Jean-Pierre Blein; Pierre Coutos-Thévenot; Didier Marion; Michel Ponchet
Journal:  Trends Plant Sci       Date:  2002-07       Impact factor: 18.313

3.  Small post-translationally modified Peptide signals in Arabidopsis.

Authors:  Yoshikatsu Matsubayashi
Journal:  Arabidopsis Book       Date:  2011-09-26

4.  Proposal for molecular mechanism of thionins deduced from physico-chemical studies of plant toxins.

Authors:  B Stec; O Markman; U Rao; G Heffron; S Henderson; L P Vernon; V Brumfeld; M M Teeter
Journal:  J Pept Res       Date:  2004-12

Review 5.  Analyzing the cryptome: uncovering secret sequences.

Authors:  Parimal Samir; Andrew J Link
Journal:  AAPS J       Date:  2011-02-16       Impact factor: 4.009

Review 6.  Polypeptide signaling molecules in plant development.

Authors:  Etienne Grienenberger; Jennifer C Fletcher
Journal:  Curr Opin Plant Biol       Date:  2014-10-15       Impact factor: 7.834

7.  Plant antimicrobial peptides snakin-1 and snakin-2: chemical synthesis and insights into the disulfide connectivity.

Authors:  Paul W R Harris; Sung-Hyun Yang; Antonio Molina; Gemma López; Martin Middleditch; Margaret A Brimble
Journal:  Chemistry       Date:  2014-03-18       Impact factor: 5.236

8.  Genes encoding 4-Cys antimicrobial peptides in wheat Triticum kiharae Dorof. et Migush.: multimodular structural organization, instraspecific variability, distribution and role in defence.

Authors:  Lyubov L Utkina; Yaroslav A Andreev; Eugene A Rogozhin; Tatyana V Korostyleva; Anna A Slavokhotova; Peter B Oparin; Alexander A Vassilevski; Eugene V Grishin; Tsezi A Egorov; Tatyana I Odintsova
Journal:  FEBS J       Date:  2013-06-18       Impact factor: 5.542

9.  Bioinformatic analysis of the CLE signaling peptide family.

Authors:  Karsten Oelkers; Nicolas Goffard; Georg F Weiller; Peter M Gresshoff; Ulrike Mathesius; Tancred Frickey
Journal:  BMC Plant Biol       Date:  2008-01-03       Impact factor: 4.215

Review 10.  Plant antimicrobial peptides.

Authors:  Robert Nawrot; Jakub Barylski; Grzegorz Nowicki; Justyna Broniarczyk; Waldemar Buchwald; Anna Goździcka-Józefiak
Journal:  Folia Microbiol (Praha)       Date:  2013-10-04       Impact factor: 2.099

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  81 in total

1.  Molecular cloning and characterization of six defensin genes from lentil plant (Lens culinaris L.).

Authors:  Reza Mir Drikvand; Seyyed Mohsen Sohrabi; Kamran Samiei
Journal:  3 Biotech       Date:  2019-02-23       Impact factor: 2.406

Review 2.  Receptor Kinases in Plant-Pathogen Interactions: More Than Pattern Recognition.

Authors:  Dingzhong Tang; Guoxun Wang; Jian-Min Zhou
Journal:  Plant Cell       Date:  2017-03-16       Impact factor: 11.277

Review 3.  Plant peptides in plant defense responses.

Authors:  Z Hu; H Zhang; K Shi
Journal:  Plant Signal Behav       Date:  2018-08-01

4.  Manipulating the Expression of Small Secreted Protein 1 (Ssp1) Alters Patterns of Development and Metabolism in the White-Rot Fungus Pleurotus ostreatus.

Authors:  Daria Feldman; Nadav Amedi; Shmuel Carmeli; Oded Yarden; Yitzhak Hadar
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

5.  The Brassicaceae species Heliophila coronopifolia produces root border-like cells that protect the root tip and secrete defensin peptides.

Authors:  Florent Weiller; John P Moore; Philip Young; Azeddine Driouich; Melané A Vivier
Journal:  Ann Bot       Date:  2017-03-01       Impact factor: 4.357

6.  Database mining of plant peptide homologues.

Authors:  Na Yuan; Chihiro Furumizu; Baolong Zhang; Shinichiro Sawa
Journal:  Plant Biotechnol (Tokyo)       Date:  2021-03-25       Impact factor: 1.133

7.  Live-cell Imaging of Fungal Cells to Investigate Modes of Entry and Subcellular Localization of Antifungal Plant Defensins.

Authors:  Kazi T Islam; Dilip M Shah; Kaoutar El-Mounadi
Journal:  J Vis Exp       Date:  2017-12-24       Impact factor: 1.355

8.  AtPep3 is a hormone-like peptide that plays a role in the salinity stress tolerance of plants.

Authors:  Kentaro Nakaminami; Masanori Okamoto; Mieko Higuchi-Takeuchi; Takeshi Yoshizumi; Yube Yamaguchi; Yoichiro Fukao; Minami Shimizu; Chihiro Ohashi; Maho Tanaka; Minami Matsui; Kazuo Shinozaki; Motoaki Seki; Kousuke Hanada
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-14       Impact factor: 11.205

9.  A miRNA-Encoded Small Peptide, vvi-miPEP171d1, Regulates Adventitious Root Formation.

Authors:  Qiu-Ju Chen; Bo-Han Deng; Jie Gao; Zhong-Yang Zhao; Zi-Li Chen; Shi-Ren Song; Lei Wang; Li-Ping Zhao; Wen-Ping Xu; Cai-Xi Zhang; Chao Ma; Shi-Ping Wang
Journal:  Plant Physiol       Date:  2020-04-02       Impact factor: 8.340

10.  MALDI Mass Spectrometry Imaging of Peptides in Medicago truncatula Root Nodules.

Authors:  Caitlin Keller; Erin Gemperline; Lingjun Li
Journal:  Methods Mol Biol       Date:  2020
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