Literature DB >> 34177333

Database mining of plant peptide homologues.

Na Yuan1,2, Chihiro Furumizu2, Baolong Zhang1, Shinichiro Sawa2.   

Abstract

In plant-pathogen interactions, pathogens employ secreted molecules, known as effectors to overcome physical barriers, modulate plant immunity, and facilitate colonization. Among these diverse effectors, some are found to mimic the plant peptides, to target host's peptide receptors, and intervene in the peptide-regulated defense pathways and/or plant development. To better understand how pathogens have co-evolved with their plant hosts in order to improve disease management, we explored the presence of plant peptide mimics in microbes by bioinformatic analysis. In total, 36 novel peptide mimics belong to five plant peptide families were detected in bacterial and fungal kingdoms. Among them, phytosulfokine homologues were widely distributed in 22 phytopathogens and one bacterium, thereby constituted the largest proportion of the identified mimics. The putative functional peptide region is well conserved between plant and microbes, while the existence of a putative signal peptide varies between species. Our findings will increase understanding of plant-pathogen interactions, and provide new ideas for future studies of pathogenic mechanisms and disease management.
© 2021 Japanese Society for Plant Biotechnology.

Entities:  

Keywords:  homologues; mimics; pathogen effectors; plant peptides

Year:  2021        PMID: 34177333      PMCID: PMC8215471          DOI: 10.5511/plantbiotechnology.20.0720a

Source DB:  PubMed          Journal:  Plant Biotechnol (Tokyo)        ISSN: 1342-4580            Impact factor:   1.133


  36 in total

1.  SignalP 4.0: discriminating signal peptides from transmembrane regions.

Authors:  Thomas Nordahl Petersen; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

2.  Root-derived CLE glycopeptides control nodulation by direct binding to HAR1 receptor kinase.

Authors:  Satoru Okamoto; Hidefumi Shinohara; Tomoko Mori; Yoshikatsu Matsubayashi; Masayoshi Kawaguchi
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

3.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

4.  Identification of potential host plant mimics of CLAVATA3/ESR (CLE)-like peptides from the plant-parasitic nematode Heterodera schachtii.

Authors:  Jianying Wang; Amy Replogle; Richard Hussey; Thomas Baum; Xiaohong Wang; Eric L Davis; Melissa G Mitchum
Journal:  Mol Plant Pathol       Date:  2010-10-01       Impact factor: 5.663

5.  A microbially derived tyrosine-sulfated peptide mimics a plant peptide hormone.

Authors:  Rory N Pruitt; Anna Joe; Weiguo Zhang; Wei Feng; Valley Stewart; Benjamin Schwessinger; José R Dinneny; Pamela C Ronald
Journal:  New Phytol       Date:  2017-05-30       Impact factor: 10.151

6.  Inflorescence deficient in abscission controls floral organ abscission in Arabidopsis and identifies a novel family of putative ligands in plants.

Authors:  Melinka A Butenko; Sara E Patterson; Paul E Grini; Grethe-Elisabeth Stenvik; Silja S Amundsen; Abul Mandal; Reidunn B Aalen
Journal:  Plant Cell       Date:  2003-09-05       Impact factor: 11.277

7.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

Review 8.  CLE peptide signaling during plant development.

Authors:  Guodong Wang; Martijn Fiers
Journal:  Protoplasma       Date:  2009-12-17       Impact factor: 3.356

9.  The bacterial effector HopX1 targets JAZ transcriptional repressors to activate jasmonate signaling and promote infection in Arabidopsis.

Authors:  Selena Gimenez-Ibanez; Marta Boter; Gemma Fernández-Barbero; Andrea Chini; John P Rathjen; Roberto Solano
Journal:  PLoS Biol       Date:  2014-02-18       Impact factor: 8.029

10.  Root Endophyte Colletotrichum tofieldiae Confers Plant Fitness Benefits that Are Phosphate Status Dependent.

Authors:  Kei Hiruma; Nina Gerlach; Soledad Sacristán; Ryohei Thomas Nakano; Stéphane Hacquard; Barbara Kracher; Ulla Neumann; Diana Ramírez; Marcel Bucher; Richard J O'Connell; Paul Schulze-Lefert
Journal:  Cell       Date:  2016-03-17       Impact factor: 41.582

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